Gene RPB_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0436 
Symbol 
ID3909992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp478894 
End bp480408 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content67% 
IMG OID637882322 
Productphosphoglyceromutase 
Protein accessionYP_484058 
Protein GI86747562 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCC GTCGCCCCGT GATGCTCGTG ATTCTCGATG GCTGGGGATG GCGCGAGGAT 
CCGGCCGACA ACGCGGTGCT GCAGGCCAAC ACGCCCACCT TCGACGCGCT GTGGACGAAC
GGCCCGCACG CCTTTCTGCG CACCTCCGGC AAATCGGTCG GCCTGCCGAA CGGCCAGATG
GGCAATTCCG AGGTCGGCCA TCTCAATATC GGCGCCGGCC GGGTGGTGAT GCAGGATCTG
CCGCGGATCA GCGACGCCAT CGCCAGCGGC GAGATCGAGC GGGCGCCCGA ATTGCTGGCC
TTCATCGAAA AATTGCGCGC CAGCGGCGGC ACCTGCCATC TGATGGGCCT GGTGTCGCCC
GGCGGCGTGC ATTCGCTGCA GGACCACGCT TGCGCGCTGG CGAAGATCTT GGACAAGGCC
GGAATCCCGA CCGTCCTGCA CGCCTTCACT GACGGCCGCG ATACGCCGCC GCAATCCGCT
GTCGACGACA TCGCCCGGCT GCGCGCCGAC CTGCCGCCGA ACGTGCCGAT CGCCACCGTC
AGCGGTCGCT ATTACGCGAT GGACCGCGAC AACCGATGGG ACCGCGTCGG CAAGGCCTAC
AAGGTGATCG CCGAGGCCGA CGGACCACGG TTTGCGGACG CCGATGCGGT GGTTGCCGCC
GGCTATGCGT CCGGGGTCAA TGACGAATTC ATCGTGCCCG CCGTGGTCGG CGACTACCAG
GGCCTACGCG ACGGCGACGG CGTGCTGTGC TTCAACTTCC GCGCCGACCG GGTGCGCGAA
ATCCTTGCGG CCCTGCTCGA TCCGGCCTTC GCCGGCTTCC CGCGCAAGCG CGTGCTGAAG
ATCGCCGCGG CCGCCGGCAT GACGCAGTAC TCGACCGCGC TGGATGCCTT GATGCGCACG
ATCTTTCCGC CGCAGAGCCT TGTGAATGGC CTCGGCCAGG TGGTCGCCGC CACCGGCCGG
CATCAGTTGC GGATGGCGGA GACCGAGAAA TATCCGCACG TCACCTACTT CCTCAATGGT
GGCGAGGAGG TGCCTTATCC GGGCGAAGAC CGCATCATGG TGCCCTCGCC GAAGGTCGCG
ACCTACGATC TGCAGCCGGA AATGTCGGCG CCCGAACTCG GCGACAAGGC GGTCGAGGCG
ATTAATTCCG GCAAATACGA CCTGATCATC CTCAACTTCG CCAATCCCGA CATGGTCGGG
CATACCGGCA GCCTGCCGGC GGCGATCAAG GCGGTCGAGA CGGTCGACGC CCAGCTCGGC
CGCATCGTCG CGGCGATCCG CGCGTCCGGC GGCGCGCTGC TGGTCACCGC CGATCACGGC
AATTGCGAAA TGATGCGCGA TCCGGTCACC GGCGGCCCGC ACACCGCGCA CACCACCAAT
CCGGTGCCGG TGCTGCTGGT GGGTGATAAC GGTCCGCTGG CTGACGGCCA GCTGTCCGAC
CTCGCGCCGA CGCTGCTGAA GCTGATGGAT CTGCCGCAAC CCGCGGAGAT GACCGGCAAA
TCGCTGATCG GGTAG
 
Protein sequence
MQSRRPVMLV ILDGWGWRED PADNAVLQAN TPTFDALWTN GPHAFLRTSG KSVGLPNGQM 
GNSEVGHLNI GAGRVVMQDL PRISDAIASG EIERAPELLA FIEKLRASGG TCHLMGLVSP
GGVHSLQDHA CALAKILDKA GIPTVLHAFT DGRDTPPQSA VDDIARLRAD LPPNVPIATV
SGRYYAMDRD NRWDRVGKAY KVIAEADGPR FADADAVVAA GYASGVNDEF IVPAVVGDYQ
GLRDGDGVLC FNFRADRVRE ILAALLDPAF AGFPRKRVLK IAAAAGMTQY STALDALMRT
IFPPQSLVNG LGQVVAATGR HQLRMAETEK YPHVTYFLNG GEEVPYPGED RIMVPSPKVA
TYDLQPEMSA PELGDKAVEA INSGKYDLII LNFANPDMVG HTGSLPAAIK AVETVDAQLG
RIVAAIRASG GALLVTADHG NCEMMRDPVT GGPHTAHTTN PVPVLLVGDN GPLADGQLSD
LAPTLLKLMD LPQPAEMTGK SLIG