Gene RPB_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0427 
Symbol 
ID3909983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp470134 
End bp470754 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID637882313 
Productheat shock protein GrpE 
Protein accessionYP_484049 
Protein GI86747553 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCAACGGACC GAAGGACAAC AACCAGGACC AGGCGCAGGC AGCCGCCGAT 
CCGGTGGTTT CCAAGCCGTA CATCATGCCG GACGACCCGG AAGACGGCGC CAACGAGGCG
CTCATCAAGG AAGCCGCCGA AGCGCGCGAC AAGATGCTGC GCACGCTGGC GGAAATGGAG
AATTTGCGCC GGCGGACCCA GAAAGAGGTC GCTGATGCAC GGACCTATGG GGTCAGCGCG
TTCGCCCGCG ACGTGCTCGA GATCGCCGAC AATCTGCAGC GCGCGCTCGA CGCCGTGCCG
GCCGAAGCCC GCGCCAATGC CGATGCCGGT CTCAAGGGGC TGATCGAGGG CGTCGAACTC
ACCGAGCGTT CACTGATCAA CGCGCTGGAA AAGAACGGCG TCCGGAAATT CGATCCGTCG
GGAGAGAAGT TCGACCCCAA TTTCCAGCAG GCGATGTACG AAGTTCCGGA TCCGTCGGTG
CCCGCCGGCA CAGTCGTGCA GGTGGTGCAG GCCGGCTTCA TGATCGGCGA ACGCGTGTTG
CGCCCGGCGC TTGTCGGCGT TGCGAAGGGC GGCGCGAAGC CCGCGCCCGC GGCGACCAAC
GGCACCGATA CCACCGCCTG A
 
Protein sequence
MTDSNGPKDN NQDQAQAAAD PVVSKPYIMP DDPEDGANEA LIKEAAEARD KMLRTLAEME 
NLRRRTQKEV ADARTYGVSA FARDVLEIAD NLQRALDAVP AEARANADAG LKGLIEGVEL
TERSLINALE KNGVRKFDPS GEKFDPNFQQ AMYEVPDPSV PAGTVVQVVQ AGFMIGERVL
RPALVGVAKG GAKPAPAATN GTDTTA