| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0421 |
|---|
| Symbol | |
|---|
| ID | 3909977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 463722 |
|---|
| End bp | 464696 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637882307 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484043 |
|---|
| Protein GI | 86747547 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATGC GCGCAAAAAC CGTCAGCTCC GCAGATCCTG TGTCCATCCC CGAGCCCGAC
GTGCGGACGT TTCTGGTCGC GGGCCAGAAA CTGACGGCGC GGCGCGCATC CCCCGGCCTG
CACCTGGTCG CAACGCCGAT CGGCAATCTC GGCGACATCA CCTTGCGGGC GCTGGAAACC
TTGGCCGGCG TCGATGTCGT CGCCTGCGAA GACACCCGAA TCACGCATCG GTTGATCGAA
CGATACGGCA TATCGGCGCA GCTCAAACCC TATCACGAAC ACAACGCCGC GCAGGCGCGG
CCGAAGATCC TCGAAAAGCT CGCCCAAGGC GGCTCGGTCG CGCTGGTATC CGACGCCGGC
ACCCCCCTGA TCTCCGACCC CGGCTACAAG CTGGTGCGCG AAGCGTACGA TGCCGGACAC
GAGGTGATCG CGCTGCCCGG CGCCTCCGCA GTGCTCGCTG CATTGGCGCT GGCCGCGCTG
CCGACCGATC GTTTTTTCTT CGACGGCTTT CTGCCGTCGA AGCAGGGCGC ACGCCGCGCG
CGTCTGAACG AACTCGCTGC GATCGACGCG ACGCTGGTCC TCTTCGAGGC CGGCAGCCGG
ATTCACAACA GCCTGCGCGA CCTCGCCGAG GTTCTGGGCA GCCGCGACGC AGCGGTGTGC
CGCGAACTCA CCAAGCTGCA TCAGGAAGTC CGCCGCGCGC CGTTGGCGAC GCTGGCGGAG
ACCGCCGAGA CGCTGGATAC GCGCGGTGAG TTCGTGGTGG TGATCGGGCC GCCCGATCCG
AACGCGCAGG CGATGACCCA GGATGCGCTC GACGACTGGC TGCGCGACGC GTTGCAGCGC
GACAGCGTCA AGGATGCGGT GGCGCAAGCC GTCGAAATCT CCGGGCGTCC TCGTCGCGAG
ATCTACGCCC GCGCGCTCGA ACTGGCGCGA CAGCGCGAGG CCGGCAATGA CGAAAGTTGC
GATGGCGAAG ACTAA
|
|---|
| Protein sequence | MAMRAKTVSS ADPVSIPEPD VRTFLVAGQK LTARRASPGL HLVATPIGNL GDITLRALET
LAGVDVVACE DTRITHRLIE RYGISAQLKP YHEHNAAQAR PKILEKLAQG GSVALVSDAG
TPLISDPGYK LVREAYDAGH EVIALPGASA VLAALALAAL PTDRFFFDGF LPSKQGARRA
RLNELAAIDA TLVLFEAGSR IHNSLRDLAE VLGSRDAAVC RELTKLHQEV RRAPLATLAE
TAETLDTRGE FVVVIGPPDP NAQAMTQDAL DDWLRDALQR DSVKDAVAQA VEISGRPRRE
IYARALELAR QREAGNDESC DGED
|
|---|
| |