| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0420 |
|---|
| Symbol | |
|---|
| ID | 3909976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 463349 |
|---|
| End bp | 463735 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484042 |
|---|
| Protein GI | 86747546 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
|---|
| TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA CTAAGCATCC ACCGGCGCCT GACCGCGTCG CCGCGTTTCA GACCGGGATC
TCCGCCGAAA CCCGCGCCGC AGCCTATCTG ATGGCGAAGG GCTACCGGAT CCTGGCGCGA
CGGTTCAAGA CGCCCTGTGG CGAGATCGAC ATCGTGGCGC AGCGGCGCCA GCTGATCGCC
TTCGTCGAGG TCAAGGCGCG CGCCCGGCTC GACGACGCCG CCTATGCGGT GACGCCCCGA
CAGCAGCAAC GCATCATCGC CGCCGCCGAG GCGTGGCTGA TGGCCAATCC CGACCACGCC
ACGTTCGAGC TGCGCTTCGA CGCGGTGCTG GTGGCGCCGA AGCGATTGCC GCAGCATTTG
CCGGCGGCGT TCGACGCGAG CCCTTGA
|
|---|
| Protein sequence | MAKTKHPPAP DRVAAFQTGI SAETRAAAYL MAKGYRILAR RFKTPCGEID IVAQRRQLIA
FVEVKARARL DDAAYAVTPR QQQRIIAAAE AWLMANPDHA TFELRFDAVL VAPKRLPQHL
PAAFDASP
|
|---|
| |