| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0417 |
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| Symbol | |
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| ID | 3909973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 460756 |
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| End bp | 461412 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882303 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_484039 |
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| Protein GI | 86747543 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTC ACGTCGTGCG CCGCGAGAAC CGCGAGTTCT ACGCGGATCT GATCGAGCAG
CAGTTTCGTA TTCGCCACCA GATCTATGTC GTTGAACGGA AGTGGACCGA ACTGGCTCGG
CCCGATGGCA GCGAGATCGA TCAGTTCGAC ACCGATGACA CGGTGTACCT GCTCGGCCTA
CAGAACGGCG AAATCGTCGC CGGCATGCGG ATGGTACCGA CGACGTCGCC GACGTTGCTG
AGCGACGTCT TCCCGCAGCT CGCACTGGAA ACTCCGGTGC GGCGCCCCGA CGTCTACGAA
TTGTCGCGGA TCTTCGTCGT CCCGAACAGG CGGGGCGAGC ACGCCGGGCC CCGCGCCGAG
GCGGTGATCC AGGCTGCAGC GATGGAATAC GGCCTCGCCA TCGGCCTGTC GGCTTTTACC
ATCGTGCTGG AAACCTGGTG GCTGCCGCGG CTGCTGGATC AGGGCTGGCG CGCGCGTCCG
CTCGGACTGC CACAGGACAT CGCCGGCATG TCGACCACCG CGGTGTTGGT CGATGTCGAC
GATCAGGCCT GGCTGGAGAT CTGCGCGCGC CGGTCGGTCC CCGGCCCGGC GCTGCAGTGG
CGGGGCCTCG ACAATGTCGA CCGCAATCCC CTTCCCAACA TCATGGAGCT GTCATGA
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| Protein sequence | MDVHVVRREN REFYADLIEQ QFRIRHQIYV VERKWTELAR PDGSEIDQFD TDDTVYLLGL
QNGEIVAGMR MVPTTSPTLL SDVFPQLALE TPVRRPDVYE LSRIFVVPNR RGEHAGPRAE
AVIQAAAMEY GLAIGLSAFT IVLETWWLPR LLDQGWRARP LGLPQDIAGM STTAVLVDVD
DQAWLEICAR RSVPGPALQW RGLDNVDRNP LPNIMELS
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