| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0413 |
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| Symbol | |
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| ID | 3908851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 456237 |
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| End bp | 458186 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882299 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_484035 |
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| Protein GI | 86747539 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.486331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGT GGTTGCGATT CAGATCGAGA CGGCGCGCGT TCGCCGGACG GTTTCCGCGG
CTTGTGTTCG CGCTGCGCTG GAGCATGATC TTTCTGGCGG CGTTCGGTGG CGCCTATGGG
TTCATCATCG GCAGCCGCGC CGAATCCTCC GGCTACAACC CGCATACTTT CGCGATCGGT
GCGAGCTTCC TGTTCGCGCT CGCCTGCCTC GGCCTCGCCG TCCAGAGCAT ACGACTGCGC
TGGTTGCGCC GGCGCCTACA GGCGTTGGAG CGGCACAACG AGACGCTGGC GGACCGCAAC
TGGGAGCTGA GGGATGCCGA GGAACGCGCG CGCGTCCTCC ACCAAGCTCG CGACGAAGCG
GACGCGCCAC GCCGCGACGA AGACGCAACG CGGCGGAAAT CGCGGCTGCT GGCGATGGCG
TCACACGAGA TCCGCACGCC GCTGAACGGC ATCATCGGCA TGAGCGGCCT GCTGCTCGAC
ACCGCGCTGA CGCCCGAGCA GGCGACCTAC GCCCGCGCGG TGAAGACTTC GGGCGACGCG
CTGGCGACGC TGATCGACGA GCTGCTCGAC TATTCCCGGA TCGAGGCCGG CAGGTTCGAA
CTCGACAGCC GGCCGTTCGC GCTGACCGCC CTGATCGAGG ACATCGTCGA GCTGCTGGCG
CCGCGGGCGC AGGCGGGCGC GCTGGAGATC GCGGCGGATA TCGATGACCG GGTACCGTCG
CGGGTGATCG GCGACGCGGC GCGCTTGCGC CAGGTGCTGC TCAATCTCGC CGGCAACGCC
ATCAAGTTCA CGTCCGTCGG CGGCGTCGTG CTGATCGTCC AGCCGGGCGA GCGCGACGGC
GAGATCAGCT TCGCGGTGCG CGACACCGGC ATCGGCATCG CCCGTGAGGC GCAGACGCGG
ATCTTCGGCG AATTCGAACA GGCCGACGAC GGCATCGCCC GCAGCTTCGG TGGCACCGGG
CTGGGGCTGA GTATCAGCCA GCGGATCGTC GAGCGGATGG GCGGTCGGAT CGCACTCGAC
AGCCAGCCGG GACGAGGCTC CACCTTCACG GCCTCGATCC CGCTCACAGC GGCGGACGAT
TCCGGCGCCT CCCCCATTGT CCAGCCGCCC GACCTCACCG GTCAGTCGAT CATGATCGCG
GCGCCGCAGA CCATCGAGGC GACGCTGGTC GCCCAGCGGC TGCAGCGCTG GGGCGCGCAC
GTGCTGGCGT TGTCCGAACT CTCCGCCGCG CGCACGGCGC TGCCCGAACG CGCCTGGTCG
GCCATCCTGA TCGATGCCGG CTTCGGCGCC GATGCGGCCG AGGCGCTGGC GCGGAGTGCC
CGACCGCATG CGGCGCAACG CGTCGTCATG CTGACGCCTG CCGCTCGCTC CGAACTATTG
CCGGATCTGC CACCTGCATT CACCGGCTAT CTCGTCAAGC CGCTGCGGGC GGCCTCGCTG
TCGGCGCGGC TGGCAGGGTC GTTGATCGAC ACCGTCGCGC CGGGGATCGC GGACGGCGAT
CCGCCGGAGA CCGCGGCAAC GGATGCGACG GCGCCAGGCG GCCGGCGGCT CTCCGTGCTG
GTCGCAGAAG ACAACGAGAT CAACGCGCTG CTGATCCGCT CGCTGCTGGC TCGGCTCGGT
CATCGCGTGG CTGTCGCCGG CGATGGCGAG CAGGCGCTGC AAAGCTGGCG CGCGGCCGCG
GCCGACGGCG CGCCCTTCGA TCTGGTGCTG ATGGACGTGC AGATGCCGAC CAGCGACGGC
ATCGCCGCCA GCCGGCAGAT CCGCGCGCAG GAGGCCGTCG GCGACGGACG CCGCACGCCG
ATTCTGGCGC TAACGGCGAA TGCGCTCGCA GAAGATCGTG AGGCCTGCTT CGCGGCGGGT
ATGGACGGCT TTCTGGTCAA GCCGCTCGAT CGCGACAAGC TGATGACGGC GCTCGACCGG
GTCGCGGCGG CGAGGCCGAT GGTCGCGTAG
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| Protein sequence | MKRWLRFRSR RRAFAGRFPR LVFALRWSMI FLAAFGGAYG FIIGSRAESS GYNPHTFAIG
ASFLFALACL GLAVQSIRLR WLRRRLQALE RHNETLADRN WELRDAEERA RVLHQARDEA
DAPRRDEDAT RRKSRLLAMA SHEIRTPLNG IIGMSGLLLD TALTPEQATY ARAVKTSGDA
LATLIDELLD YSRIEAGRFE LDSRPFALTA LIEDIVELLA PRAQAGALEI AADIDDRVPS
RVIGDAARLR QVLLNLAGNA IKFTSVGGVV LIVQPGERDG EISFAVRDTG IGIAREAQTR
IFGEFEQADD GIARSFGGTG LGLSISQRIV ERMGGRIALD SQPGRGSTFT ASIPLTAADD
SGASPIVQPP DLTGQSIMIA APQTIEATLV AQRLQRWGAH VLALSELSAA RTALPERAWS
AILIDAGFGA DAAEALARSA RPHAAQRVVM LTPAARSELL PDLPPAFTGY LVKPLRAASL
SARLAGSLID TVAPGIADGD PPETAATDAT APGGRRLSVL VAEDNEINAL LIRSLLARLG
HRVAVAGDGE QALQSWRAAA ADGAPFDLVL MDVQMPTSDG IAASRQIRAQ EAVGDGRRTP
ILALTANALA EDREACFAAG MDGFLVKPLD RDKLMTALDR VAAARPMVA
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