Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0412 |
Symbol | |
ID | 3908850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 455117 |
End bp | 456130 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882298 |
Product | hypothetical protein |
Protein accession | YP_484034 |
Protein GI | 86747538 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.666795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACAG GCCGCGCACC ACCCGATTCG GTTGCATGCG GTCGCGAGGA TCCCATGCAG ACCGACCATC TCGCCCGCTC GAAGAAATTC ATCAAACTGC TTCGCCCCGA CATGGCCGGC GCCGCGGCGC AGACCGCGAT CACCTGGCTC AAGCCGGCGC TGAAGATCGC CGATCACGGC AAGCCGATCG CGCAACCGGC GCTGACTCCG GCGACGCTGG GCCGGCTCGG CCCGCTGGAA GTGCGGCTGG CGCAGAAGAA GCAGGACATC AAGCGCGCGC AGAAACTCCG CTACCGCGTG TTCTACAAGG ACGGCACCGC GATCGCCGAC GCCGCCACGC TGCTGGCGCG CCGCGACAAG GACGCGTTCG ACCGGATTTG CGACCATCTT CTGGTGCTCG ATCACGCCGC CAAGCCGTCG CTCAGCGGCA AGCAGCCGGT GGTCGGCACC TATCGCCTGC TGCGGCAGGA GATCGCCAAT CGCCACGGCG GCTTCTACAC CGAAAACGAG TTCGACATCG GCGGCATGAT CGCGCGGCAT CCCCGGCTGC GCTTCCTCGA GCTCGGCCGC TCCTGCGTGC TGCCGCCCTA CCGCAACAAA CGCACCGTCG AATTGTTGTG GCACGGCATC TGGAGCTATG TCCGCCAGCA CGGCGTCGAC GTCATGATCG GCTGCGCCTC CTTCGACGGC ACCGATCCGG CGCGGCTCGC GCTGCCGCTG TCGTTCCTGC ATCATTACGC ATCGGCGCCG GAGCCGTGGC GCGCCCGCGC GCATCCGTCG CGCTATGTCG AGATGAACCG GATGCCGAAG GAAGCGGTCA ACCAGAAGGC CGCGCTGCGC GAGCTGCCGC CGCTGATCAA GGGCTATCTG CGGCTCGGCG CCACGATCGG CGAGGGCGCA GTGATCGACC ATCAGTTCGG CACCACCGAC GTGCTGATCA TCATGCCGGT GTCGGCGATC AGCAGCCGCT ACATCGAGCA TTTCGGCGTG GATGCGACGC GGCACGCGGC GTAA
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Protein sequence | MRTGRAPPDS VACGREDPMQ TDHLARSKKF IKLLRPDMAG AAAQTAITWL KPALKIADHG KPIAQPALTP ATLGRLGPLE VRLAQKKQDI KRAQKLRYRV FYKDGTAIAD AATLLARRDK DAFDRICDHL LVLDHAAKPS LSGKQPVVGT YRLLRQEIAN RHGGFYTENE FDIGGMIARH PRLRFLELGR SCVLPPYRNK RTVELLWHGI WSYVRQHGVD VMIGCASFDG TDPARLALPL SFLHHYASAP EPWRARAHPS RYVEMNRMPK EAVNQKAALR ELPPLIKGYL RLGATIGEGA VIDHQFGTTD VLIIMPVSAI SSRYIEHFGV DATRHAA
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