| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0404 |
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| Symbol | |
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| ID | 3908842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 449319 |
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| End bp | 449882 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882290 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_484026 |
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| Protein GI | 86747530 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.37323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.560368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGG CTGCGGGTGA AAGCTCGCCT CAGATTTGGC ACGGCACCAC CATCCTGACC
GTCCGTAAGG GCGGCAAGGT GGTGATCGGC GGCGACGGCC AGGTTTCGAT CGGCCAGACC
GTGATCAAGG CCAACGCCAA GAAGGTCCGC AAGCTCGGCA AGGGAGACGT GATCGGCGGC
TTCGCCGGCG CCACCGCCGA CGCTTTCACG CTGTTCGAGC GGCTCGAAGC CAAGCTCGAG
CAATATCCCG GGCAGCTCAC CCGCGCCGCG GTCGAGCTCG CCAAGGACTG GCGCACCGAC
CGCTATCTGC GCCGGCTGGA GGCGATGATG ATCGTCGCCG ACAAGGACGT CTCGCTGGTG
CTGACCGGCA CGGGCGACGT GCTGGAGCCG GAATACGGCG TGATGGCGAT CGGCTCCGGC
GGCAATTACG CGCTGGCGGC GGCGCGCGCG CTCGCCGACA CCGACCAGGA CGCCGAAACC
ATCGTTCGCA AGGCGCTCGA TATCGCCGCC GACATCTGCG TCTACACCAA TCGCAATTTG
ACCCTTGAGA CGCTGACCGC GTGA
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| Protein sequence | MYSAAGESSP QIWHGTTILT VRKGGKVVIG GDGQVSIGQT VIKANAKKVR KLGKGDVIGG
FAGATADAFT LFERLEAKLE QYPGQLTRAA VELAKDWRTD RYLRRLEAMM IVADKDVSLV
LTGTGDVLEP EYGVMAIGSG GNYALAAARA LADTDQDAET IVRKALDIAA DICVYTNRNL
TLETLTA
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