| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0403 |
|---|
| Symbol | hslU |
|---|
| ID | 3908841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 447864 |
|---|
| End bp | 449165 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637882289 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_484025 |
|---|
| Protein GI | 86747529 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.236378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TCTCACCCCG CGAAATCGTT TCCGAACTCG ACCGCTTCAT CGTCGGCCAG
GCCGACGCCA AGCGCGCGGT CGCCATCGCG CTGCGCAACC GCTGGCGGCG GCTGCAGCTC
GAAGGCGCGC TGCGCGAAGA AGTGCTGCCG AAGAACATCC TGATGATCGG GCCGACCGGC
GTCGGCAAGA CCGAGATCGC GCGCCGGCTG GCCAAGCTCG CCAACGCACC GTTCCTCAAA
GTCGAGGCCA CCAAATTCAC CGAGGTCGGC TATGTCGGCC GCGACGTCGA GCAGATCATC
CGCGATCTGG TCGAAGTGGC GATCGCGCAG GTGCGCGAGA AGAAGCGCAA GGACGTCCAG
GCCCGCGCCC AGATCGCCGC CGAGGAACGC GTGCTCGATG CGCTGGTCGG CCCGGGATCG
AGCCCGGCGA CGCGGGACTC GTTTCGCCGC AAGCTGCGGA CCGGCGAGCT CAACGACAAG
GAAATCGAAA TCGAGACCCA GGCCGGCGGC GGCTCGCCGA TGTTCGAAAT TCCGGGCATG
CCGGGCGGCC AGATCGGCGC GATTTCGATC GGCGACATCT TCGGCAAGAT GGGTGGCCGC
ACCAAGACGC GCAGGCTCAC CGTCGTCGAT TCGCACGACA TCCTCGTCAA CGAGGAAGCC
GACAAGCTGC TCGACAATGA CCAGCTGGTG CAGGAAGCCA TCAACGCCGT CGAGAACAAC
GGCATCGTGT TTCTCGACGA GATCGACAAG ATCTGCGTGC GCGACGGCCG CAGCGGCGGC
GAGGTCTCGC GCGAGGGCGT GCAGCGCGAT CTGCTGCCGC TGATCGAAGG CACCACGGTC
GCCACCAAGC ACGGCGCGGT GAAGACCGAT CACATCCTGT TCATCGCCTC CGGCGCGTTC
CACATCGCCA AGCCGTCCGA CCTGCTGCCG GAGCTGCAGG GCCGGCTGCC GATCCGGGTC
GAGCTCAACG CACTCTCCCG CGACGACATG CGCCGGATTC TGACCGAGCC GGAAGCCTCG
CTGATCAAGC AATATGTGGC GCTGCTGCAG ACCGAAGGCG TGACGCTGGA ATTCGGCGAC
GACGCCATCG ACGCGCTCGC CGACGTCGCG GTCGCGGTCA ACTCCACCGT CGAGAACATC
GGCGCGCGGC GGCTGCAGAC GGTGATGGAG CGCGTGCTCG ACGACATCTC CTTCGGCGCG
CCGGACCGAG GCGGCGAGAC CATCCGGATC GACGCCGACT ACGTCCAGAA GAACGTCGGC
GATCTGGCGA AGAACACGGA TTTGAGCCGG TTCATCTTGT AG
|
|---|
| Protein sequence | MTDFSPREIV SELDRFIVGQ ADAKRAVAIA LRNRWRRLQL EGALREEVLP KNILMIGPTG
VGKTEIARRL AKLANAPFLK VEATKFTEVG YVGRDVEQII RDLVEVAIAQ VREKKRKDVQ
ARAQIAAEER VLDALVGPGS SPATRDSFRR KLRTGELNDK EIEIETQAGG GSPMFEIPGM
PGGQIGAISI GDIFGKMGGR TKTRRLTVVD SHDILVNEEA DKLLDNDQLV QEAINAVENN
GIVFLDEIDK ICVRDGRSGG EVSREGVQRD LLPLIEGTTV ATKHGAVKTD HILFIASGAF
HIAKPSDLLP ELQGRLPIRV ELNALSRDDM RRILTEPEAS LIKQYVALLQ TEGVTLEFGD
DAIDALADVA VAVNSTVENI GARRLQTVME RVLDDISFGA PDRGGETIRI DADYVQKNVG
DLAKNTDLSR FIL
|
|---|
| |