| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0402 |
|---|
| Symbol | |
|---|
| ID | 3908840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 446945 |
|---|
| End bp | 447538 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637882288 |
|---|
| Product | Smr protein/MutS2 |
|---|
| Protein accession | YP_484024 |
|---|
| Protein GI | 86747528 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.953066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.213623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG TCGCCCCACC GCTCGATCCA CCCGCAGCCC CGCGCCGCAA GCGCAGCCTG
AGCGAGGACG AGCGCGTGCT GTGGGACAGC GTCGCCAAGC AGGTCAAGCC GCTGCGCGGC
CGCCCGCGAC TGACCCGGAT CGAACTGCCG GCGGCTCCGT CGGATACGCC CGTCGCGAAA
CCGCCGCCGC CGGCAACGCA GCAGCCGATC AAGCGCCCGG TCAAGCTGGC GACGCCGATG
AGCCCGCCGC CGCTGGCCTC GCTCGGCCGG CGCGAGCGCT CGCATCTATC GCGCGGCCGC
AAGGACATCG ACGCCCGGAT CGATCTGCAC GGCATGACCC AGGCACGCGC GCATCACGCG
CTGTTGCGCT TTCTGCAAAG CGCCAGCCAT GATGGGCTGA GTTTCGTGCT GGTGATCACC
GGCAAGGGCG CGAGGCTCGG CGGTGATCCC GAACGCGGCG TGCTGCGCCG CCAGGTGCCG
CTCTGGCTGA GCCTGCCGGA ATTCCGCGCT TACGTCGTCG GCTTCGACGA AGCCGCGATC
GGCCACGGCG GCGAAGGCGC GCTGTATGTG CGGGTGCGCC GGGCGCGCGG TTAA
|
|---|
| Protein sequence | MKRVAPPLDP PAAPRRKRSL SEDERVLWDS VAKQVKPLRG RPRLTRIELP AAPSDTPVAK
PPPPATQQPI KRPVKLATPM SPPPLASLGR RERSHLSRGR KDIDARIDLH GMTQARAHHA
LLRFLQSASH DGLSFVLVIT GKGARLGGDP ERGVLRRQVP LWLSLPEFRA YVVGFDEAAI
GHGGEGALYV RVRRARG
|
|---|
| |