Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0400 |
Symbol | |
ID | 3908838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 444674 |
End bp | 445381 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882286 |
Product | import inner membrane translocase, subunit Tim44 |
Protein accession | YP_484022 |
Protein GI | 86747526 |
COG category | [S] Function unknown |
COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.363906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATCT ACACCATCAT CTTCCTTGCG CTTGCGGTGT TCATCTTCCT GCGTCTGCGC AACGTCTTGG GGCAGCGGAC CGGCAGCGAG CGTCCGCCGT TCGACCGCGC CGCGGCGCGG GACATGATCC CGGGCAAGCA GGACACCAAT GTCGTGTCGA TGCCGGGCTC GGTGATCGAC CAGTCCCCGA TTGCTCCGAG CGCCGACGTC GTTCCGCCGT CGGATCGCTG GAAGGGCATC GCCGAGCCGG ATTCGCCGCT GGAGCACGGC CTCAATGCGG TGTTCACCCA GGATTCGTCG TTCGACGCCA ACCATTTCCT CTCGGGCGCC AAGGGCGCTT ACGAGATGAT CGTGATGGCG TTCGCCAATG GCGACCGCCG CGCGCTGAAG GACCTGCTGT CGAGCGAAGT CTATGAGAGC TTCGAGGCGG CGATCAAGGA TCGCGAGAAG AACGAACTGA AGACCGAGAC ACGCTTCGTC GCGATCGAGA AGGCCGAACT GCTCGGCGCC GAAGTGCGCG ACCACGTCGC CCAGCTCACC GTGAAGTTCG TGTCGCAGAT GATCTCGGTC ACCCGCGACA AGGCCGGCGC TGTCGTCGAT GGCAGCCCCG ACAAGGTCGC CGATATCACC GACGTTTGGA CCTTCGCCCG CGATATCAGC TCGCGCGATC CGAACTGGAA GCTGGTTGGC ACCGGAAACG AGCTCTAG
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Protein sequence | MDIYTIIFLA LAVFIFLRLR NVLGQRTGSE RPPFDRAAAR DMIPGKQDTN VVSMPGSVID QSPIAPSADV VPPSDRWKGI AEPDSPLEHG LNAVFTQDSS FDANHFLSGA KGAYEMIVMA FANGDRRALK DLLSSEVYES FEAAIKDREK NELKTETRFV AIEKAELLGA EVRDHVAQLT VKFVSQMISV TRDKAGAVVD GSPDKVADIT DVWTFARDIS SRDPNWKLVG TGNEL
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