Gene RPB_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0395 
Symbol 
ID3908833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp440799 
End bp441638 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID637882281 
Producthypothetical protein 
Protein accessionYP_484017 
Protein GI86747521 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.851588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.572136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG ACGGCAGCTA TTTTCATCTC CATCTGGTGT CCGACTCGAC CGGCGAAACC 
TTGATCACGG TGTCCCGCGC GGTCGCGGCG CAATACGCCA ATGTCAATGC GGTGGAGCAC
GTCTACCCGC TGGTGCGCAG CCAGAAGCAG CTCGACCGCG TGCTGCAGGA GATCGAGGAA
TCGCCCGGCA TCGTGCTGTT CACCCTGCTG GAGGGTGAAC TGGTTGCCCG GCTCGAAGCC
AAGTGCCAGG AGATCAACAG CCCGAGCCTG TCGATCATCG GCCCGGTGAT GCAATTGTTC
GAGGCCTATC TCGGCGCCTC CACCACCGGC CGGGTCGGCG CGCAGCACAC TTTGAACGCC
GAATATTTCA AGCGCATCGA CGCGCTGAAC TACTCGATGA TGCACGACGA CGGCCAGCAT
GTCGAAGGCC TCGAAGAGGC CGATGTGGTG CTGGTCGGTG TATCGCGCAC CTCGAAGACG
CCGACCTCGA TCTATCTCGC CAATCGCGGC ATTCGCACCG CCAACGTGCC GCTGGTCGCC
GGGATACCAA TTCCGCATCA GCTCGAAACC CTGAAGAAGC CGCTGGTGGT CAGCCTGCAC
GCCTCGCCCG AACGGCTGAT CCAGGTCCGG CAGAACCGGC TGCTCAGCCT CGGCGCCGGC
GCCGGCAACG ATTCCTATAT CGACCGCCAG TCCGTCACCG ACGAGGTGTT GCTGGCGCGC
AAGCTCAGCG CCAAATACGG CTGGTCGCTG CTCGACGTCA CCCGTCGGTC GATCGAGGAG
ACCGCGGCCG CGATCATGAA GCTGCTCGCC GATCGGCAAC GCCAGAGGAT GTCCGAATGA
 
Protein sequence
MLTDGSYFHL HLVSDSTGET LITVSRAVAA QYANVNAVEH VYPLVRSQKQ LDRVLQEIEE 
SPGIVLFTLL EGELVARLEA KCQEINSPSL SIIGPVMQLF EAYLGASTTG RVGAQHTLNA
EYFKRIDALN YSMMHDDGQH VEGLEEADVV LVGVSRTSKT PTSIYLANRG IRTANVPLVA
GIPIPHQLET LKKPLVVSLH ASPERLIQVR QNRLLSLGAG AGNDSYIDRQ SVTDEVLLAR
KLSAKYGWSL LDVTRRSIEE TAAAIMKLLA DRQRQRMSE