| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0387 |
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| Symbol | holA |
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| ID | 3908825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 429782 |
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| End bp | 430810 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882273 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_484009 |
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| Protein GI | 86747513 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCGC TGCGTGGACG AGACGCCACC TCCTTTCTGG CCCGCCCCGA TCCGGGCCGG
CCGATCATCC TGCTGTTCGG CCCCGATGCC GGCCTGGTAC GCGAACGCGC CGACGCGCTG
ATCGCCTCGG CGCTCGACGA TCCCAACGAC CCGTTCGCGC TGGTGCGGCT CGACGGCGAC
GAGCTCGCGG CCGAGCCGTC GCGGCTGGTC GACGAGGCGA ATTCGATCCC GATGTTCGGC
GGCCGCCGCG CGATCCGCAT CCGCGCCGGC TCGCGCAGCT TCGTCGCCGG CGTCGAGACG
CTCGTCGCGT CGCCGCCGAA GGAATGCCGG ATCGTGATCG AGGCCGGCGA CATCAAGCCG
GACAACGCGC TGCGCAAGGC CTGCGAGAAA GCCGCAAGCG CGGTGGCGAT CGGCTGCTAT
CCGGACGCCG AGGCCGATCT CGCCAAGCTG ATCGACGACG AACTCCGCGC GGCCCAATTG
CAGATCGGCC GCGACGCTCG CGGCGTGCTG ATGACGCTGC TCGGCGGCGA TCGCCAGGCC
TCGCGCAACG AAGTCCGCAA GCTCGCGCTG TATGCGCACG GCCAGGGCGA GATCACGCTC
GACGACGTGA TCGCCTGCGT GTCGGACGCC TCCGACCTCA AGCTCGACGT CATTGTGGAT
GCGGCGTTCT CCGGCAAGCC GCAGGTCGTC GAAAGCGAAT TCGCCAAGGC GATGGTCGCC
GGCACCTATC CGGGGCAGAT CATTCTCGCG GCGCAGCGCC ACGCCGCGTT CCTGCACAAG
ACCAGCCTCG CGGTCGACGC CGGCACGCCG GCCGCGACAG CGCTCGACAG CGGCTTTCCG
CGATTGCATT TTTCGCGCAA GGCCGCGTCC GAAACGGCGC TGCGCAATCT CGGCCCATCG
CGCCTGGCGC AGATCATCGA CCAGCTCGCC ACCGCCGCGC TCGACACGAG ACGCCAGGCC
ACCCTCGGCG CCGCCATCGC CCAGCGCACG CTGCTGTCGA TCGCGGTAAG CGCGCGGCGA
AGGAGTTAG
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| Protein sequence | MVALRGRDAT SFLARPDPGR PIILLFGPDA GLVRERADAL IASALDDPND PFALVRLDGD
ELAAEPSRLV DEANSIPMFG GRRAIRIRAG SRSFVAGVET LVASPPKECR IVIEAGDIKP
DNALRKACEK AASAVAIGCY PDAEADLAKL IDDELRAAQL QIGRDARGVL MTLLGGDRQA
SRNEVRKLAL YAHGQGEITL DDVIACVSDA SDLKLDVIVD AAFSGKPQVV ESEFAKAMVA
GTYPGQIILA AQRHAAFLHK TSLAVDAGTP AATALDSGFP RLHFSRKAAS ETALRNLGPS
RLAQIIDQLA TAALDTRRQA TLGAAIAQRT LLSIAVSARR RS
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