Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0379 |
Symbol | |
ID | 3908817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 420707 |
End bp | 421519 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882265 |
Product | exodeoxyribonuclease III |
Protein accession | YP_484001 |
Protein GI | 86747505 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTCA CGCTCACGAC CTGGAACATC AATTCGGTGC GGCTACGCAT CGAGCTGGTG GCGAAATTCC TCAAGGCGCA GCGGCCAGAC GTGCTGTGCC TTCAGGAGAC CAAATGCCCG GACGACGCGT TTCCGGCGAA GCGCTTCAAG CGGCTCGGCT ACGAGCACAT CGCGCTCAAC GGCCAGAAGG GCTATCACGG CGTCGCGGTG ATCTCGAAGA TCCCGTTTCT CGCCACCGAC ATCCGCACCT TCTGCGACAA TATCGACTCG CGCCACATCT CGGTGTCGCT GCAGACCGGC GCGGCCGATC CGCCGCTGCT GCTGCATAAT TTCTACGTGC CCGCCGGCGG CGACATTCCC GATCCCGAGG CCAATCCGAA ATTCAAACAC AAGCTGTCGT TCCTCGACGA GATGCGGGCC TGCGCGCCGC TGCATCCGTC GGGCGACGCG CGGCACATTC TGGTCGGCGA CCTCAACGTC GCGCCGCACG AGCACGACGT CTGGTCGCAC AAGCAGTTAC TTAAAGTCGT GTCGCACACC CCGGTGGAAT GCGACAAGCT GCTCGCGGTG CAGGCCGCCG GCAATTGGGT CGACGTCGCG CGCGAGCGGA TTCCGCTGTC GGAGAAGATC TACACCTGGT GGAGCTACCG CGCCGCCGAC TGGACGATCG GCGACCGCGG CCGCAGGCTC GACCACATCT GGGTCTCCGA AGCGCTGCGC GCCCGCGTCA CCGACTTCAA GATCCTGCGC GACGCCCGCA GCTGGGAACG CCCGAGCGAC CACGTCCCGG TGACGGTGAC GATGGAGCTG TGA
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Protein sequence | MSFTLTTWNI NSVRLRIELV AKFLKAQRPD VLCLQETKCP DDAFPAKRFK RLGYEHIALN GQKGYHGVAV ISKIPFLATD IRTFCDNIDS RHISVSLQTG AADPPLLLHN FYVPAGGDIP DPEANPKFKH KLSFLDEMRA CAPLHPSGDA RHILVGDLNV APHEHDVWSH KQLLKVVSHT PVECDKLLAV QAAGNWVDVA RERIPLSEKI YTWWSYRAAD WTIGDRGRRL DHIWVSEALR ARVTDFKILR DARSWERPSD HVPVTVTMEL
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