Gene RPB_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0379 
Symbol 
ID3908817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp420707 
End bp421519 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID637882265 
Productexodeoxyribonuclease III 
Protein accessionYP_484001 
Protein GI86747505 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA CGCTCACGAC CTGGAACATC AATTCGGTGC GGCTACGCAT CGAGCTGGTG 
GCGAAATTCC TCAAGGCGCA GCGGCCAGAC GTGCTGTGCC TTCAGGAGAC CAAATGCCCG
GACGACGCGT TTCCGGCGAA GCGCTTCAAG CGGCTCGGCT ACGAGCACAT CGCGCTCAAC
GGCCAGAAGG GCTATCACGG CGTCGCGGTG ATCTCGAAGA TCCCGTTTCT CGCCACCGAC
ATCCGCACCT TCTGCGACAA TATCGACTCG CGCCACATCT CGGTGTCGCT GCAGACCGGC
GCGGCCGATC CGCCGCTGCT GCTGCATAAT TTCTACGTGC CCGCCGGCGG CGACATTCCC
GATCCCGAGG CCAATCCGAA ATTCAAACAC AAGCTGTCGT TCCTCGACGA GATGCGGGCC
TGCGCGCCGC TGCATCCGTC GGGCGACGCG CGGCACATTC TGGTCGGCGA CCTCAACGTC
GCGCCGCACG AGCACGACGT CTGGTCGCAC AAGCAGTTAC TTAAAGTCGT GTCGCACACC
CCGGTGGAAT GCGACAAGCT GCTCGCGGTG CAGGCCGCCG GCAATTGGGT CGACGTCGCG
CGCGAGCGGA TTCCGCTGTC GGAGAAGATC TACACCTGGT GGAGCTACCG CGCCGCCGAC
TGGACGATCG GCGACCGCGG CCGCAGGCTC GACCACATCT GGGTCTCCGA AGCGCTGCGC
GCCCGCGTCA CCGACTTCAA GATCCTGCGC GACGCCCGCA GCTGGGAACG CCCGAGCGAC
CACGTCCCGG TGACGGTGAC GATGGAGCTG TGA
 
Protein sequence
MSFTLTTWNI NSVRLRIELV AKFLKAQRPD VLCLQETKCP DDAFPAKRFK RLGYEHIALN 
GQKGYHGVAV ISKIPFLATD IRTFCDNIDS RHISVSLQTG AADPPLLLHN FYVPAGGDIP
DPEANPKFKH KLSFLDEMRA CAPLHPSGDA RHILVGDLNV APHEHDVWSH KQLLKVVSHT
PVECDKLLAV QAAGNWVDVA RERIPLSEKI YTWWSYRAAD WTIGDRGRRL DHIWVSEALR
ARVTDFKILR DARSWERPSD HVPVTVTMEL