Gene RPB_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0376 
Symbol 
ID3908642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp415696 
End bp416958 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID637882262 
Productaminotransferase, class I and II 
Protein accessionYP_483998 
Protein GI86747502 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGG GCGCCTTGCA AAACTGGCGT TTTCGAATGG CTGTGCCCGC CTCCTCCGCA 
TCAGCGCACG CTGTCGGCAG TGCTCACGCT GCCGCGGGCA GCGAGCGCTC GCCATTCGCG
CGCCTCACCG AATTGCTGGC GCCGTATCAG CCCGGCGAGC GGCTGATCAA TCTGTCGGTC
GGCGAGCCGC AGCATCCGGT GCCGGATTTC GTCGGCCCGG TGCTGGCGCG GCATACCGCC
GAGTTCGGCC GCTATCCGAT GGCCAAGGGC ATCGCCCCGT TCCGCCAGGC CGCCGCGGCC
TGGTTGACGA AACGCTTCGC GCTGCCGCGC GCGCCCGATC CCGAGACGCA AGTGCTGGTG
CTGAACGGCA GCCGCGAGGG CCTGTTCCTC GCCGCGGTCG CGGCCGCGCG CTATGTCGGC
CCGCGCGACG GCACGCCGGC GATCCTGATG CCGAATCCGT TCTATCCGGC CTATGCGGCG
GGCGCCCGCG CGGCGGGCTG CGAGGCGGTG TTCCTGCCGA CCAATCCCGC CAACGGCTTC
CTGCCCGATC TCGATGCGCT CGACGCCGCG ACGCTGAAGC GCACGGTGGC GATCTACATC
GCCTCGCCGG CCAATCCGCA GGGCGCGGTG GCCTCGACTG GTTACTTCGC GAAGTTGAAG
GCGCTGGCGG ATCGCCACGG CTTCCTGATC CTCGCCGACG AGTGCTACTC GGAAATCTAC
ACCCGCGATG CGCCCGGCAG CGCGCTGCAG GCGGCCGGCC CCGATTTCCG CAACATCGCG
GTGTTCCAGT CGCTGTCGAA GCGCTCGAAC CTTCCGGGCA TGCGCGTCGG CTTCGTCGCC
GGCGACGCCG ATTTCCTCGC GGCCTATCAC GAGCTGCGCA ACGTCGCCGC GCCGCAGGTG
CCGGTGCCGC TACAGCACGT CGCGGTCGCC GCCTATGCGG ACGAGGCGCA TGTCGAGGAG
AACCGGCGGC TGTACCGGCT GAAATTCGAT CTCGCCGACC AGATCATCGG CGCGCGCTAC
GGTTATCAGC GCCCCGCCGG CGGCTTCTGC CTGTGGCTCG ACGTCGCCGC GCAGGGCGGC
GACGAAGCCG CGACGATCAA TTTGTTCAAG CACGGCGGCG TCCGCGTCAT TCCCGGCAGC
TATCTGGCGC GGCCGCAGGC CGACGGCAGC AATCCCGGCG CCGGCTACAT TCGCGTCGCG
ATGGTGCAGG ACAGTGAGAC CACCGCCGAA GCGCTGCACC GTCTGGTGCG GATTCTCGAG
TGA
 
Protein sequence
MRPGALQNWR FRMAVPASSA SAHAVGSAHA AAGSERSPFA RLTELLAPYQ PGERLINLSV 
GEPQHPVPDF VGPVLARHTA EFGRYPMAKG IAPFRQAAAA WLTKRFALPR APDPETQVLV
LNGSREGLFL AAVAAARYVG PRDGTPAILM PNPFYPAYAA GARAAGCEAV FLPTNPANGF
LPDLDALDAA TLKRTVAIYI ASPANPQGAV ASTGYFAKLK ALADRHGFLI LADECYSEIY
TRDAPGSALQ AAGPDFRNIA VFQSLSKRSN LPGMRVGFVA GDADFLAAYH ELRNVAAPQV
PVPLQHVAVA AYADEAHVEE NRRLYRLKFD LADQIIGARY GYQRPAGGFC LWLDVAAQGG
DEAATINLFK HGGVRVIPGS YLARPQADGS NPGAGYIRVA MVQDSETTAE ALHRLVRILE