Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0365 |
Symbol | |
ID | 3908631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 406823 |
End bp | 407416 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882251 |
Product | periplasmic protein thiol |
Protein accession | YP_483987 |
Protein GI | 86747491 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.69916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCGTCACCGA CACCCCCTCG CCGACGCGGC GCTCCCTGAT GGTGGCGCTG CCGCTGCTGG TGTTCGCGGG ACTCGCGGCG CTGTTCTGGA TCCGGCTCGG CGACCGCGAC ATTTCCAAGA TCCCTTCGGC GCTGATCGGC CGCGAGGTAC CGCAGACCGA GCTGCCGGCG CTCGACGCGC TCACGCGCGA CGGCGCGGCG GTGCCGGGGC TGGGGCCGGC GCAGTTCAAG GGCAAGGTCA GCGTCGTCAA TGTCTGGGCG TCGTGGTGCG TGCCGTGCCA CGACGAGGCG CCGCTGCTGA CTGCGCTCGG CGACGACAAG CGCTTCCAGA TCGTCGGCAT CAACTACAAG GACAGGCCCG ACAACGCCCG CCGCTTCCTC GGCCGCTACG GCAATCCGTT CGCCGCCGTC GGCGTCGACG CCAGCGGTCG TGCCGCGATC GAATGGGGCG TCTACGGCGT GCCGGAGACC TTCGTGGTCG GCCGCGACGG CAAGATCGCC TACAAGCTGG TCGGCCCGAT CACGCCGGAC AATCTCGACA AGGTGTTGAA GCCGGAAATC GAGAAGGCGC TGGGAAAGTC CTAG
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Protein sequence | MSTPVTDTPS PTRRSLMVAL PLLVFAGLAA LFWIRLGDRD ISKIPSALIG REVPQTELPA LDALTRDGAA VPGLGPAQFK GKVSVVNVWA SWCVPCHDEA PLLTALGDDK RFQIVGINYK DRPDNARRFL GRYGNPFAAV GVDASGRAAI EWGVYGVPET FVVGRDGKIA YKLVGPITPD NLDKVLKPEI EKALGKS
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