Gene RPB_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0365 
Symbol 
ID3908631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp406823 
End bp407416 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content69% 
IMG OID637882251 
Productperiplasmic protein thiol 
Protein accessionYP_483987 
Protein GI86747491 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID[TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.69916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCGTCACCGA CACCCCCTCG CCGACGCGGC GCTCCCTGAT GGTGGCGCTG 
CCGCTGCTGG TGTTCGCGGG ACTCGCGGCG CTGTTCTGGA TCCGGCTCGG CGACCGCGAC
ATTTCCAAGA TCCCTTCGGC GCTGATCGGC CGCGAGGTAC CGCAGACCGA GCTGCCGGCG
CTCGACGCGC TCACGCGCGA CGGCGCGGCG GTGCCGGGGC TGGGGCCGGC GCAGTTCAAG
GGCAAGGTCA GCGTCGTCAA TGTCTGGGCG TCGTGGTGCG TGCCGTGCCA CGACGAGGCG
CCGCTGCTGA CTGCGCTCGG CGACGACAAG CGCTTCCAGA TCGTCGGCAT CAACTACAAG
GACAGGCCCG ACAACGCCCG CCGCTTCCTC GGCCGCTACG GCAATCCGTT CGCCGCCGTC
GGCGTCGACG CCAGCGGTCG TGCCGCGATC GAATGGGGCG TCTACGGCGT GCCGGAGACC
TTCGTGGTCG GCCGCGACGG CAAGATCGCC TACAAGCTGG TCGGCCCGAT CACGCCGGAC
AATCTCGACA AGGTGTTGAA GCCGGAAATC GAGAAGGCGC TGGGAAAGTC CTAG
 
Protein sequence
MSTPVTDTPS PTRRSLMVAL PLLVFAGLAA LFWIRLGDRD ISKIPSALIG REVPQTELPA 
LDALTRDGAA VPGLGPAQFK GKVSVVNVWA SWCVPCHDEA PLLTALGDDK RFQIVGINYK
DRPDNARRFL GRYGNPFAAV GVDASGRAAI EWGVYGVPET FVVGRDGKIA YKLVGPITPD
NLDKVLKPEI EKALGKS