Gene RPB_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0357 
Symbol 
ID3908623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp399482 
End bp400195 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID637882243 
Producthypothetical protein 
Protein accessionYP_483979 
Protein GI86747483 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC CGTTCCGTTC TGTGATCGCC GCCGCTCTGG TCGTCTCCGC TCTGGTTGTC 
GCCGCGCCGG CTTCGGCCCA ATCCGCACCA CCGTCCCCGC CATCGATCAC CGTGACCGGC
GAGGCGCAGA AATCGGTTGC GCCGGATATC GCCCAGATCG AGGCCGGCGT GTCCAATATG
GCGAAGACCG CCCGCGCCGC CGCCGAGGCC AACAACGTCG CGATGGGCAA GGTGCTGCTC
GAATTGAAGA ACGCCGGCGT CGACGGCAAG GACACCCAGA CCTCGCGGCT GTCGATCCAG
CCGCAATATG CGTCGAACCG CTCGGGGCCG AGCGAGATCA ACGGCTATCT GGCCAGCAAT
CTGGTGACCG TGAAGGTGCG CGACATCGCG CGGGTCGCCG GGCTGGTCGA TACGCTGGTG
ACCGCCGGCG CCAACGAGAT CCGCGGCATC GGCTTCCGGG TCGCCGATCC GTCGAAGCTG
CTCGACGACG TCCGCGCCGA GGCGATCGCC GACGCCCGCC GCAAGGCCGA GGTCTATGCC
CGCGCCGCCG GCGTCACGCT CGGCGCGCCG CTGCTGATCT CGGAGGACAC GCAGCAGGGC
ATCGCGCCGA TGCGCAAGAT GGTGGCGATG CAATCCGCCG CCACGCCGGT CGCCCCCGGC
GAGGAGACGC TGAGCGTCAG CGTGACGGTG AGTTGGGCCA TCAAGGCGCC GTAG
 
Protein sequence
MTMPFRSVIA AALVVSALVV AAPASAQSAP PSPPSITVTG EAQKSVAPDI AQIEAGVSNM 
AKTARAAAEA NNVAMGKVLL ELKNAGVDGK DTQTSRLSIQ PQYASNRSGP SEINGYLASN
LVTVKVRDIA RVAGLVDTLV TAGANEIRGI GFRVADPSKL LDDVRAEAIA DARRKAEVYA
RAAGVTLGAP LLISEDTQQG IAPMRKMVAM QSAATPVAPG EETLSVSVTV SWAIKAP