Gene RPB_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0355 
Symbol 
ID3908621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp397815 
End bp398216 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID637882241 
ProductPilT protein 
Protein accessionYP_483977 
Protein GI86747481 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.922806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTCG TTGTCGACGC GTCCGTTGCC GTGTCGTGGT GCATGCAGGA CGAAGCTTCG 
GCTATAGCGG ATAGAGCATT CGATCTTTCG AGAATCGCGA CCGCAATCGT TCCAGCTCAC
TGGTGGTTCG AAACACGAAA TGCATTGCTG GTGGCAGTTC GCCGTAAGCG ATTGGAGCTT
CCACGTCTCG AGAGCTTTTT ACTGCAACTC AATCTTGTGG CGATCGAGAT TGCTCCAATT
CCTGACGACC GCTCTCTCAT CACGTTGGCC CAGCGCCATC GCCTGACCTT CTACGACGCC
GCCTATCTCG AACTGGCGCA ACGCGAGCGA ATCGAGCTGG CGACGCTCGA CAAGGCGCTG
GCGCGCGCGG CGAAGTCCGA AGACGTCGCG CTGATCGCAT GA
 
Protein sequence
MRFVVDASVA VSWCMQDEAS AIADRAFDLS RIATAIVPAH WWFETRNALL VAVRRKRLEL 
PRLESFLLQL NLVAIEIAPI PDDRSLITLA QRHRLTFYDA AYLELAQRER IELATLDKAL
ARAAKSEDVA LIA