Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0355 |
Symbol | |
ID | 3908621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 397815 |
End bp | 398216 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637882241 |
Product | PilT protein |
Protein accession | YP_483977 |
Protein GI | 86747481 |
COG category | [R] General function prediction only |
COG ID | [COG4113] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.922806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTTCG TTGTCGACGC GTCCGTTGCC GTGTCGTGGT GCATGCAGGA CGAAGCTTCG GCTATAGCGG ATAGAGCATT CGATCTTTCG AGAATCGCGA CCGCAATCGT TCCAGCTCAC TGGTGGTTCG AAACACGAAA TGCATTGCTG GTGGCAGTTC GCCGTAAGCG ATTGGAGCTT CCACGTCTCG AGAGCTTTTT ACTGCAACTC AATCTTGTGG CGATCGAGAT TGCTCCAATT CCTGACGACC GCTCTCTCAT CACGTTGGCC CAGCGCCATC GCCTGACCTT CTACGACGCC GCCTATCTCG AACTGGCGCA ACGCGAGCGA ATCGAGCTGG CGACGCTCGA CAAGGCGCTG GCGCGCGCGG CGAAGTCCGA AGACGTCGCG CTGATCGCAT GA
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Protein sequence | MRFVVDASVA VSWCMQDEAS AIADRAFDLS RIATAIVPAH WWFETRNALL VAVRRKRLEL PRLESFLLQL NLVAIEIAPI PDDRSLITLA QRHRLTFYDA AYLELAQRER IELATLDKAL ARAAKSEDVA LIA
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