| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0350 |
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| Symbol | trmD |
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| ID | 3908616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 393368 |
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| End bp | 394126 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637882236 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_483972 |
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| Protein GI | 86747476 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.684119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGC GCGCCACCGT CCTCACGCTG TTTCCGGAGA TGTTTCCCGG GCCGCTCGGC
GTCAGCCTGG CGGGGCGGGG GCTGGCGGCC GGGCTGTGGG CGCTGGAGGC GCGCGACATC
CGCGACTCGG CCACTGACCG ACACCGTAGC GTCGACGACA CCCCGGCCGG CGGCGGGCCC
GGCATGGTGC TGCGCGCCGA CGTGCTGGCG GCGGCGATCG ACGCCGCCGA TCCTGTGCCG
GGCCGTCCCC GGCTGGTGAT GAGCCCGCGC GGTCGGCCAT TGACCCAGGC GCGCGTCGCG
GAACTGGCGG CTGGGCCCGG CCCGCTGATC GTCTGCGGCC GGTTCGAGGG CATCGACCAG
CGCGTGATCG ACGCCCGGAA CCTGGAGGAG GTCTCGATCG GCGACTACGT GCTGTCCGGC
GGCGAGATCG CCGCGCTGGC GCTGATCGAT GCCTGCGTCC GGCTGCTGCC CGGGGTGATG
GGCAAGCTCG ATTCCTCGGC CGAGGAGAGC TTTTCGGCCG GGTTGCTGGA ATATCCGCAA
TACACAAGGC CGAAGAGTTT CGAGGGCCGT CCGATCCCCG AGATCCTGAC CTCGGGCGAC
CACGCCAAGG TCGCCGCCTG GCGGCAGGCC GAGGCCGAGG CGCTGACCCG GGCGCGCCGG
CCTGATTTGT GGGCCGCAAG ATCTGTGGCA AGACCCGCCG CAAACGCCCC CGCAAAAGGC
GAATCGCAAA AAACGCCAAA AAACAAGACG GACGGGTGA
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| Protein sequence | MTWRATVLTL FPEMFPGPLG VSLAGRGLAA GLWALEARDI RDSATDRHRS VDDTPAGGGP
GMVLRADVLA AAIDAADPVP GRPRLVMSPR GRPLTQARVA ELAAGPGPLI VCGRFEGIDQ
RVIDARNLEE VSIGDYVLSG GEIAALALID ACVRLLPGVM GKLDSSAEES FSAGLLEYPQ
YTRPKSFEGR PIPEILTSGD HAKVAAWRQA EAEALTRARR PDLWAARSVA RPAANAPAKG
ESQKTPKNKT DG
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