Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0341 |
Symbol | |
ID | 3908607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 386284 |
End bp | 387162 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882227 |
Product | Citryl-CoA lyase |
Protein accession | YP_483963 |
Protein GI | 86747467 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC CGCGCCGCAG CCTGTTGTTC ATGCCGGGGT CGAATGCGCG CGCGCTGGAG AAGGCCCGCC TGCTGCCGGC CGACGGCCTG ATCCTCGACC TCGAGGACGC CGTGGCGCCG GACGCCAAGG CCGCCGCGCG CGACCAGATC GCAACCGCGG TCGCCGCCAA GGGATACGGC CACCGCGAGG TGCTGGTGCG GATCAATGCG CTGGATTCGC CGTGGTGGCG CGACGACATC GCGATGGCCG CCAAGGTCGG CCCCGACGGT ATCCTGGTTC CGAAAGTGTC GAGCATCGAG GATATCGCCG CCATCGCCGA GCGCCTCACC GAGCTCGACG CCGATCCGGC GATCCGGGTC TGGATCATGA TCGAGACCGC GCGCGGCGTG TTGCACGCCG AGGAGCTGGC GGCGCAGACC CACATCGCCG GCACCCGGCT CGCCGGCTTC GTGTTCGGGC CGAACGACAT TTCACGCGAG ACCGGCATCC GGATGCTACC GGGCCGCGCC ACGATGATTC CGATGATCAG CCACTGCATC CTCGCCGCCC GCGCGCACGG CCTCGTGGTG CTCGACGGCC CCTACAGCGA CATCGCCAAT GTCGACGGCT TCGCCCAGGA ATGCGCCCAG GCGCGCGATC TCGGCTTCGA CGGCAAGACG CTGATCCATC CCGGCCAGAT CGACGCCTGC AACGCCACCT TCACGCCGCC GGCGGAGGAC GTGGCGCAGG CCCGCGCGAT CCTCGCCGCC TTCGAGCGCC CGGAAAATGC CGGCCGCGGC GCGATCCAGC TCGACGGCCG CATGGTCGAG CGCCTGCACG CCGAAATCGC CAAAAAGACC ATCGCGATCG CCGACGCGAT CGAGCGGGCG GGGCGGTGA
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Protein sequence | MIRPRRSLLF MPGSNARALE KARLLPADGL ILDLEDAVAP DAKAAARDQI ATAVAAKGYG HREVLVRINA LDSPWWRDDI AMAAKVGPDG ILVPKVSSIE DIAAIAERLT ELDADPAIRV WIMIETARGV LHAEELAAQT HIAGTRLAGF VFGPNDISRE TGIRMLPGRA TMIPMISHCI LAARAHGLVV LDGPYSDIAN VDGFAQECAQ ARDLGFDGKT LIHPGQIDAC NATFTPPAED VAQARAILAA FERPENAGRG AIQLDGRMVE RLHAEIAKKT IAIADAIERA GR
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