Gene RPB_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0341 
Symbol 
ID3908607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp386284 
End bp387162 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID637882227 
ProductCitryl-CoA lyase 
Protein accessionYP_483963 
Protein GI86747467 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC CGCGCCGCAG CCTGTTGTTC ATGCCGGGGT CGAATGCGCG CGCGCTGGAG 
AAGGCCCGCC TGCTGCCGGC CGACGGCCTG ATCCTCGACC TCGAGGACGC CGTGGCGCCG
GACGCCAAGG CCGCCGCGCG CGACCAGATC GCAACCGCGG TCGCCGCCAA GGGATACGGC
CACCGCGAGG TGCTGGTGCG GATCAATGCG CTGGATTCGC CGTGGTGGCG CGACGACATC
GCGATGGCCG CCAAGGTCGG CCCCGACGGT ATCCTGGTTC CGAAAGTGTC GAGCATCGAG
GATATCGCCG CCATCGCCGA GCGCCTCACC GAGCTCGACG CCGATCCGGC GATCCGGGTC
TGGATCATGA TCGAGACCGC GCGCGGCGTG TTGCACGCCG AGGAGCTGGC GGCGCAGACC
CACATCGCCG GCACCCGGCT CGCCGGCTTC GTGTTCGGGC CGAACGACAT TTCACGCGAG
ACCGGCATCC GGATGCTACC GGGCCGCGCC ACGATGATTC CGATGATCAG CCACTGCATC
CTCGCCGCCC GCGCGCACGG CCTCGTGGTG CTCGACGGCC CCTACAGCGA CATCGCCAAT
GTCGACGGCT TCGCCCAGGA ATGCGCCCAG GCGCGCGATC TCGGCTTCGA CGGCAAGACG
CTGATCCATC CCGGCCAGAT CGACGCCTGC AACGCCACCT TCACGCCGCC GGCGGAGGAC
GTGGCGCAGG CCCGCGCGAT CCTCGCCGCC TTCGAGCGCC CGGAAAATGC CGGCCGCGGC
GCGATCCAGC TCGACGGCCG CATGGTCGAG CGCCTGCACG CCGAAATCGC CAAAAAGACC
ATCGCGATCG CCGACGCGAT CGAGCGGGCG GGGCGGTGA
 
Protein sequence
MIRPRRSLLF MPGSNARALE KARLLPADGL ILDLEDAVAP DAKAAARDQI ATAVAAKGYG 
HREVLVRINA LDSPWWRDDI AMAAKVGPDG ILVPKVSSIE DIAAIAERLT ELDADPAIRV
WIMIETARGV LHAEELAAQT HIAGTRLAGF VFGPNDISRE TGIRMLPGRA TMIPMISHCI
LAARAHGLVV LDGPYSDIAN VDGFAQECAQ ARDLGFDGKT LIHPGQIDAC NATFTPPAED
VAQARAILAA FERPENAGRG AIQLDGRMVE RLHAEIAKKT IAIADAIERA GR