Gene RPB_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0333 
Symbol 
ID3908714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp378183 
End bp378962 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID637882219 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_483955 
Protein GI86747459 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TCAAATCGCT GCTGATCCCC GGCGTCGACA AGACGCTGTT GGTCAAGGAC 
GCCGCCCGGC TGATGCCGGA TCTCACGCGC CGGCGTTTTC TCTCCGGCGG CGCCAGCCTC
GGCGCGCTGA CGCTGCTGAC CGGCTGCGAC GTGATCGACG GCGCCTCGGC CGAGAACCTG
CTCGCCAAGG TGTCGAAGTT CAACGATGCG GTGCAGGCGG CGATCTTCGA TCCGAACACG
CTGGCGCCGA CCTACAGCGA AAAGGACATC ACCCGGCCGT TCCCGTTCAA CGCGTATTAC
TCGCTGGACG AGGCGCCGGA GATCGACGGC AAGGATTGGG CGCTCGAAGT CTCGGGCCTG
GTCGACAGCA AGAAGAGCTG GACGCTCGCT GAACTGACGC AGCTCCCCGA AGTCGGGCAG
ATCACCCGGC ACATCTGCGT CGAGGGCTGG AGCGCGATCG GCTCGTGGAG CGGCGTGCGG
CTGAGCGATT TCCTCAAACT GGTCGGCGCC GACACCAACG CCAAATACGT CTGGTTCCGC
TGCGCCGACG ACTACACCTC GCCGATCGAC ATGCCGACCG CCCTGCATCC GCAGACCCAG
ATGACGCTGA AATACGACGG CCAGATCCTG CCGCGCGCCT ACGGCTATCC GATGAAGATC
CGAATCCCGA CCAAGCTCGG CTTCAAGAAT CCGAAATACG TCGTCGCGAT GGAAGTCACC
AACGACTACA AAGGCGGCTA TTGGGAAGAC CAGGGCTACA ATTCGTTCAG CGGACTGTAA
 
Protein sequence
MLRIKSLLIP GVDKTLLVKD AARLMPDLTR RRFLSGGASL GALTLLTGCD VIDGASAENL 
LAKVSKFNDA VQAAIFDPNT LAPTYSEKDI TRPFPFNAYY SLDEAPEIDG KDWALEVSGL
VDSKKSWTLA ELTQLPEVGQ ITRHICVEGW SAIGSWSGVR LSDFLKLVGA DTNAKYVWFR
CADDYTSPID MPTALHPQTQ MTLKYDGQIL PRAYGYPMKI RIPTKLGFKN PKYVVAMEVT
NDYKGGYWED QGYNSFSGL