Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0333 |
Symbol | |
ID | 3908714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 378183 |
End bp | 378962 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637882219 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_483955 |
Protein GI | 86747459 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA TCAAATCGCT GCTGATCCCC GGCGTCGACA AGACGCTGTT GGTCAAGGAC GCCGCCCGGC TGATGCCGGA TCTCACGCGC CGGCGTTTTC TCTCCGGCGG CGCCAGCCTC GGCGCGCTGA CGCTGCTGAC CGGCTGCGAC GTGATCGACG GCGCCTCGGC CGAGAACCTG CTCGCCAAGG TGTCGAAGTT CAACGATGCG GTGCAGGCGG CGATCTTCGA TCCGAACACG CTGGCGCCGA CCTACAGCGA AAAGGACATC ACCCGGCCGT TCCCGTTCAA CGCGTATTAC TCGCTGGACG AGGCGCCGGA GATCGACGGC AAGGATTGGG CGCTCGAAGT CTCGGGCCTG GTCGACAGCA AGAAGAGCTG GACGCTCGCT GAACTGACGC AGCTCCCCGA AGTCGGGCAG ATCACCCGGC ACATCTGCGT CGAGGGCTGG AGCGCGATCG GCTCGTGGAG CGGCGTGCGG CTGAGCGATT TCCTCAAACT GGTCGGCGCC GACACCAACG CCAAATACGT CTGGTTCCGC TGCGCCGACG ACTACACCTC GCCGATCGAC ATGCCGACCG CCCTGCATCC GCAGACCCAG ATGACGCTGA AATACGACGG CCAGATCCTG CCGCGCGCCT ACGGCTATCC GATGAAGATC CGAATCCCGA CCAAGCTCGG CTTCAAGAAT CCGAAATACG TCGTCGCGAT GGAAGTCACC AACGACTACA AAGGCGGCTA TTGGGAAGAC CAGGGCTACA ATTCGTTCAG CGGACTGTAA
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Protein sequence | MLRIKSLLIP GVDKTLLVKD AARLMPDLTR RRFLSGGASL GALTLLTGCD VIDGASAENL LAKVSKFNDA VQAAIFDPNT LAPTYSEKDI TRPFPFNAYY SLDEAPEIDG KDWALEVSGL VDSKKSWTLA ELTQLPEVGQ ITRHICVEGW SAIGSWSGVR LSDFLKLVGA DTNAKYVWFR CADDYTSPID MPTALHPQTQ MTLKYDGQIL PRAYGYPMKI RIPTKLGFKN PKYVVAMEVT NDYKGGYWED QGYNSFSGL
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