Gene RPB_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0332 
Symbol 
ID3908713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp377547 
End bp378179 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID637882218 
Producthypothetical protein 
Protein accessionYP_483954 
Protein GI86747458 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA CCACGCTCAG TGAAAACGAT GCCGCCGCCG GCGCTGCGCG ACAAGTGATC 
CAGCCCGCCT GGGTGCGGGT CGTGCACTGG ATCAACGCCG CCGCGATGAT CGTGATGATC
CTATCCGGCT GGCAGATCTA CAACGCTTCG CCGCTGTTCG ATTTCCAGTT CTCGCGCGCG
ATCACGCTGG GCGGCTGGCT CGGCGGCGGA TTGCTGTGGC ACTTCGCGGC GATGTGGGTG
CTGATGCTCA ACGGCCTGGT GTATCTCGCG GTCGGCTTCG CCACCGGCCG CTTCCGCCGC
AAGCTGTGGC CGATCACGCC CTCCGGCGTC GTCACCGACC TCGCCAGGGC CGCGACCTTC
CGGCTGTCGC ACGCCGACCT CACCACCTAC AACTATGTCC AGAAGCTGCT CTATGCCGGC
ATCATTCTGG TCGGAATCCT GGCCGTGCTG TCGGGCCTGT CGATCTGGAA GCCGGTCCAG
TTCCAGACGC TGACGGCCCT GTTCGGCGGC TACGACACCG CGCGCTACGT GCATTTCTTC
GCGATGGCGG CGATCGTCGG ATTCCTCGTC ATTCACGTCG TGCTGGCGGT GCTGGTGCCG
AAGAGCCTGC GGGCGATGAT CCTCGGGAGA TAG
 
Protein sequence
MSSTTLSEND AAAGAARQVI QPAWVRVVHW INAAAMIVMI LSGWQIYNAS PLFDFQFSRA 
ITLGGWLGGG LLWHFAAMWV LMLNGLVYLA VGFATGRFRR KLWPITPSGV VTDLARAATF
RLSHADLTTY NYVQKLLYAG IILVGILAVL SGLSIWKPVQ FQTLTALFGG YDTARYVHFF
AMAAIVGFLV IHVVLAVLVP KSLRAMILGR