Gene RPB_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0329 
Symbol 
ID3908710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp373834 
End bp375369 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content65% 
IMG OID637882215 
Productmalonyl-CoA synthase 
Protein accessionYP_483951 
Protein GI86747455 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC ACGGAAACAC CAACATGAAC GCCAATCTGT TTGCTCGCCT GTTCGATGCG 
CCCGGTGATC CTGACAAACG CGCGATCGAG ACCGCCGACG GCGGCAGCAT CAGCTACGGC
GAACTGGTCG CGCGCGCGGG CCGCGTCGCC AATGTGCTGA TCGCGCGCGG CGTCAAGATC
GGCGATCGTG TTGCAGCGCA AACCGAGAAA TCGGTCGAGG CGCTGGTGTT GTATCTCGCC
ACAGTGCGCG CCGGCGCGGT CTATCTGCCG CTCAATACCG CCTACACGTT GCACGAACTC
GATTACTTCA TCACCGACGC CGAGCCGTCG CTGGTGGTGT GCGATCCGGC CACGCGCGAC
GGGATCGCGG CGATCGCCGC CAAGGTGAAT GCGGCTGTCG AAACGCTGGA TGCCGGGGGG
CAAGGTTCGT TGACCGATGC GGCAGCGCAG GCCTCGTCCG ACTTCGCCAC CGTGCCGCGC
GAAGGCTCCG ATCTCGCCGC GATCCTCTAC ACCTCGGGCA CCACCGGCCG CTCCAAGGGC
GCGATGCTGT CGCACGACAA TCTCGCCTCG AACTCGCTGA CGCTGGTCGA CTATTGGCGC
TTTTCGCCCG ACGACGTGCT GATCCATGCG CTGCCGATCT ATCACACGCA TGGGCTGTTC
GTGGCGAGCA ACGTCACGCT GTTCGCCCGC GCGTCGATGA TCTTCCTGCC GAAGCTCGAT
CCGGAGCGGA TCATCGATCT GATGCCGCGC GCCACCGTGC TGATGGGCGT GCCGACATTC
TACACGCGGC TGCTGCAGAG CCCGCGGCTG ACCAAGGATG CGACCAGCCA TATGCGGTTG
TTCATCTCCG GCTCGGCGCC GCTGCTCGCC GAGACCCATC GCGAATGGTC GGCGCGCACC
GGCCATGCCG TGCTCGAGCG CTACGGCATG ACCGAGACCA ACATGAACAC CTCGAATCCG
TATGACGGCG AGCGCGTGCC CGGCGCGGTC GGGTTTCCGC TGCCCGGCGT GTCGGTGCGC
GTCACCGATC CGGACGCCGG CCGCGAATTG CCGCGCGGCG AGATCGGCAT GATCGAGGTG
AAGGGCCCGA ACGTGTTCAA GGGCTATTGG CGGATGCCGG AGAAGACCGC GGCGGAATTC
CGTCCCGACG GCTTCTTCAT CACCGGCGAT CTCGGCAAGA TCGACGAGCG CGGCTATGTC
CACATCCTCG GCCGCGGCAA GGATCTGGTG ATCACCGGCG GCTTCAACGT CTATCCGAAG
GAGATCGAGA GCGAGATCGA CGCCATGCCG GGCGTGGTCG AATCTGCGGT GATCGGCCTG
CCGCACGCCG ATTTCGGCGA GGGCGTCACC GCGGTGGTGG TGCGTAGCAG CCAATCCTCG
CTCGACGAGG CGGAGGTGCT GAAGAGCCTC GACGGCCAGA TCGCCAAGTT CAAGATGCCC
AAGAAGGTGA TCATCGTCGA CGAACTGCCG CGCAACACCA TGGGCAAGGT GCAGAAGAAC
GTGCTGCGCA GCACCTACAA GGATATTTAC AAGTAA
 
Protein sequence
MNAHGNTNMN ANLFARLFDA PGDPDKRAIE TADGGSISYG ELVARAGRVA NVLIARGVKI 
GDRVAAQTEK SVEALVLYLA TVRAGAVYLP LNTAYTLHEL DYFITDAEPS LVVCDPATRD
GIAAIAAKVN AAVETLDAGG QGSLTDAAAQ ASSDFATVPR EGSDLAAILY TSGTTGRSKG
AMLSHDNLAS NSLTLVDYWR FSPDDVLIHA LPIYHTHGLF VASNVTLFAR ASMIFLPKLD
PERIIDLMPR ATVLMGVPTF YTRLLQSPRL TKDATSHMRL FISGSAPLLA ETHREWSART
GHAVLERYGM TETNMNTSNP YDGERVPGAV GFPLPGVSVR VTDPDAGREL PRGEIGMIEV
KGPNVFKGYW RMPEKTAAEF RPDGFFITGD LGKIDERGYV HILGRGKDLV ITGGFNVYPK
EIESEIDAMP GVVESAVIGL PHADFGEGVT AVVVRSSQSS LDEAEVLKSL DGQIAKFKMP
KKVIIVDELP RNTMGKVQKN VLRSTYKDIY K