Gene RPB_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0318 
Symbol 
ID3908699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp361424 
End bp362119 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID637882204 
Producthypothetical protein 
Protein accessionYP_483940 
Protein GI86747444 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.811126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCT CCTCAGCGCC GCTCCATCAC CCGTCGATGA GCACCGCTAT CGCCGACCCT 
CTCGCCTTCA TTCGCGACAA CACGAGGCTG CGGCCCGTGC CGCTGGTGCC GGAAATCTCG
CTGCACGTCG CCGACGAGGC GCTGCCGCTG TGGAGCAAGA CCGAGGAGGA ACTCGGCGAG
GCCGGGCTGC CGCCGCCGTT CTGGGCGTTC GCCTGGGCCG GCGGGCAGGC GCTGGCGCGC
TATGTGCTCG ATCATCCGGA CTGCGTCGCC GGCCGCGACG TGATCGATTT CGCCTCCGGC
TCGGGGCTGG TGGCGATCGC GGCGATGAAG GCCGGGGCGC GCCGCGTCAC CGCCTTCGAC
ATCGACGGCT TCGCCCGCGA GGCGATCGCC GTCAACGCGG CGGCGAACGG CGTCGCGCTC
GCCATCTGCG GCGACGATCT GCTCGCCGCC GAGCACGCCG CGCCGGCGCA GACCGTGCTC
GCCGGCGACA TCTTCTATCA GCAGGACATC GCCGAACTGG CCTTCGCCAT GCTGCAGCGC
CGCTCGGCCG GCGGCGCGCA GGTGCTGATC GGCGATCCTG GGCGCACTTA TTTGCCGAAG
GACAGGCTCA GCCAGCTCGC CAGCTACGGC GTCCCGGTGA CGCGCGAACT CGAGGACGCC
GAGATCAAGG CGACCGGCGT GTGGACGCTG ACATGA
 
Protein sequence
MDISSAPLHH PSMSTAIADP LAFIRDNTRL RPVPLVPEIS LHVADEALPL WSKTEEELGE 
AGLPPPFWAF AWAGGQALAR YVLDHPDCVA GRDVIDFASG SGLVAIAAMK AGARRVTAFD
IDGFAREAIA VNAAANGVAL AICGDDLLAA EHAAPAQTVL AGDIFYQQDI AELAFAMLQR
RSAGGAQVLI GDPGRTYLPK DRLSQLASYG VPVTRELEDA EIKATGVWTL T