Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0288 |
Symbol | |
ID | 3907916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 326291 |
End bp | 326908 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882171 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_483910 |
Protein GI | 86747414 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.104009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0123555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC GGGTCAAGCC CGCGTATGAC GCTGGGATTG GCGATCAGCC ACGAGTTGAA TTTCGCATGT CCGACCTCCT GATCCGCCCG GCCGCCGCCG CCGACCTGCC CGCCATCACC GCGATCTACG CCGACGCGGT GCGCACCGGC ACCGCGACCT TCGAACTGAC GCCGCCGGAT CTCGCCGAAA TGACGCGGCG GTTCGAAACG CTCGCCGGCG GCGGCTTTCC CTATCTGGTC GCGCTGCTTG GCGACCGCGT CGCCGGCTAC GCCTATGCGG GACCGTACCG GCCGCGTCCG GCCTATCGCT TCACCGTGGA GAACTCGGTC TATCTCGATC CGCTCGCGCA TCGCCGCGGC CTCGGCACCG CGCTGCTGCA CGAGCTGATC GCGCAATGCG AGGCGCGCGG CTTCCGCCAG ATGATCGCGG TGATCGGCGA TTCCACCAAT GCCGGCTCGG TCGCCGTGCA TCGCAAGAGC GGCTTCGACC TGATCGGCGT CCACCGCAAT GTCGGATTCA AATTCGGCCG CTGGCTCGAC ACCGTGATGA TGCAACGCGC GCTCGGCGCG GGCGGCGAGA CGGTGCCGGA GGTGGGAGCG GGGCCGAGCA ACGCGTGA
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Protein sequence | MDTRVKPAYD AGIGDQPRVE FRMSDLLIRP AAAADLPAIT AIYADAVRTG TATFELTPPD LAEMTRRFET LAGGGFPYLV ALLGDRVAGY AYAGPYRPRP AYRFTVENSV YLDPLAHRRG LGTALLHELI AQCEARGFRQ MIAVIGDSTN AGSVAVHRKS GFDLIGVHRN VGFKFGRWLD TVMMQRALGA GGETVPEVGA GPSNA
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