Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0287 |
Symbol | |
ID | 3907915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 325319 |
End bp | 326110 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882170 |
Product | hypothetical protein |
Protein accession | YP_483909 |
Protein GI | 86747413 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0137467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACT TGGACCGTAA CTACGCCTCT CCCTTCGGCC GGGCCGCCGG ACGCGTCGAC AGCGCGGCCG TCGATGCTGG CCTGCGCTCT TATATGCTGC GCATCTACAA CTACATGACG ATCGGCCTGG CCATCACCGG CCTGGCGGCG CTCGGCGTCT ATATGGGCGC CGTGACCCCG GATGCGGCCG GTGCGGCCGG CAAGATCGGC AACACCTACC TCACCACCTT CGGCGTCGCG ATGTTCGCCA GCCCGCTGAA GTGGGTGTTC ATCCTGGCGC CGCTCGCCAT GGTGTTCGCG ATCTCGTTCG GCATCAACCG GCTGAAGCCC GCGACCGCGC AATTGCTGTT CTGGGCGTTC GCCGCCCTGA TGGGCATCTC GCTGTCGTCG ATCTTCCTGG TGTACACCCA CACCTCGATC GTGCGGGTGT TCTTCATCAC CGCCGCGTCG TTCGGTGCGC TGAGCCTCTA CGGCTACACC ACCAAGCGTG ACATGACCGG GATGGGCTCG TTCCTGATCA TGGGCCTGTT CGGCGTCATC ATCGCCAGCG TGGTCAACCT GTTCGTCGCC TCGTCGATGC TGCAGTTCAT CGTCTCGGTG GTCGGCGTGC TGGTGTTCGC GGGCCTCACC GCCTACGACA CGCAGCGGCT GAAGAACGAC TACATGTACG GCTACGCCTC GGAAGGCGGC GACGTGGCGG AGCGCGCCGC GATCACCGGC GCCCTGTCGC TGTACCTGAA CTTCATCAAC CTGTTCACGC TGCTGCTGCA GCTGCTGGGA CAGAAAGAGT AA
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Protein sequence | MSDLDRNYAS PFGRAAGRVD SAAVDAGLRS YMLRIYNYMT IGLAITGLAA LGVYMGAVTP DAAGAAGKIG NTYLTTFGVA MFASPLKWVF ILAPLAMVFA ISFGINRLKP ATAQLLFWAF AALMGISLSS IFLVYTHTSI VRVFFITAAS FGALSLYGYT TKRDMTGMGS FLIMGLFGVI IASVVNLFVA SSMLQFIVSV VGVLVFAGLT AYDTQRLKND YMYGYASEGG DVAERAAITG ALSLYLNFIN LFTLLLQLLG QKE
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