| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0286 |
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| Symbol | |
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| ID | 3907914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 322418 |
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| End bp | 325000 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882169 |
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| Product | hypothetical protein |
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| Protein accession | YP_483908 |
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| Protein GI | 86747412 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.463422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0456114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGG TCGCCGATCC GCTCGCCAGA TCCGCGCCGC CGTCGCGCGG CTGGTCGCTG
CCGTTGCGCT ATGCGTTGCG CGAGATGCGC GGCGGTCTCA ACGGCTTCTA CGTCTTCATC
GCCTGCATCG CGCTCGGCGT GATGGCGATC GCCGGGGTCG GCTCGGTCGC CGCCAGCCTC
GGCGAAGGCC TCGCCCGCGA AGGCCGCACC CTGCTCGGCG GCGATGTCGC GTTCTCGCTG
ATCCAGCGCG AGGCGACGCC GCAAGAACTC GGCTATCTGC GCGACCGCGC GCCGGTCTCG
GTCGCGGCAT CGATGCGGGG CATGGCGCGC ACCGCCGAAG GCGCCTCGGC GCTGGTCGAG
ATCAAGGCGG TCGACAGCCT GTATCCGATG CTCGGCGAAT TGAAGCTCGA TCCGCCGCTG
CCGCTCGCCG ACGTGCTGGC GAAGCGCGAC GGCGCGTTCG GCGCCGCCGC CGACGCCGCG
TTTCTCGCCC GGCTCGACCT CAAGATCGGC GACCGCGTCA GTGTCGGCAG CGCCGCGTTC
CAGATCCGCA GCGTGGTCGC CTCCGAGCCC GACAAGCTCG CCGGCAATCC CGGCTTCGGA
CCGCGCTTCC TGATCAGTGA GGACGCATTG CGCGCCACGC AATTGCTGCA GCCCGGCAGC
CTGGTGCGCT GGATCTATCG CGTCCGGCTG CCCGACAACC GCGCCGACGA CAAGGCGGCG
CAGGATTTCG CCGACGCCAC CCGCGCGGCG CTGCCGCAGG CCGGCTGGGA AATCCGCAGC
CGCGGCAACG CTTCGCCACA GCTCGAGCGC ACCATCACCC GCTTCACCCA GTTCCTGACA
CTGGTCGGCC TCGCCGCGCT GCTGGTCGGC GGCGTCGGCG TCGCCAACGC GGTCAAGAGC
CACATCGACC GCCGCCGCGA CGTGATCGCA TCGTTGAAAG CGCTCGGCGC CACCGGCCGC
GACGTGTTCG CGATCTATCT GACCCAGGTG TTGGTGCTGG CGACGATCGG CTCGCTGATC
GGGCTCGCGC TCGGCGCGGC GCTGCCGTTT CTGATCGTCG GCGCGTTCGG CACATTGCTG
CCGCTGCCGG TGGTGGCGGC GCTGCATCCC GGGGAGCTGA TTCTGTCGCT GGTCTACGGC
CTTTTGACCG CACTCGCCTT CGGGCTGTGG CCGCTGGCGC AAGTGCGCGA TGTGCCGGTG
GCGACGCTGT TCCGCGAAGC CGCGACCGCG GATGCGCATC GGCCGAGCCT GCGGCACATC
GTCTGGATCG GCGCGGTGAT CGCGCTGCTA CTCGCGGTGG TGATCGGGCT GGCTTACGAC
AAGCGCGTCG CGATCGCCTT CGTGGTCGCT GCGGTGCTGG TGTTCCTGCT GCTGCGCGGC
GTCGCGGCGG GGCTGATGGC GATCGCACGG CGGCTGCCGC GCTCGCGCAT CACCATGCTG
CGGCTGGCGA TCGCCAACAT CCACCGCCCG GGCGCGCTGA CCCCGTCGGT GGTGCTGTCG
CTCGGCCTCG GCCTCTCGGT GCTGGTGACG ATCGCGCAGA TCGACGGCAA TCTGCGGCGG
CAATTCCTCG CCGCGCTGCC CGAAAGGGCG CCGACGTTCT TCTTCATCGA CATCCCGTCG
AGCGAGACCG AGCAATTCGG CGCCTTCCTG AAACAGGCTG CGCCGAACGC CACGGTCGAG
GACGTGCCGA TGCTGCGCGG CCGGATTGTC GCCGCGCGCG GCGTCCGCGC CGAGGATCTC
AAGCCGGGGC AGGACGCCGA ATGGGTGCTG CAGAGCGACC GCGGCCTGAC CTATGCGGCC
GAGATGCCAC CCGGCTCCAA GGTCGTCGAA GGCCATTGGT GGCCCAAGGA TTACGACGGC
AAGCCGCTCG TATCGTTCGA GAAAAAACTG GCCGACGGGC TCGGCCTGAA GATCGGCGAC
GAGGTCACCG TCAACGTCCT CGGCCGCGAA CTCACTGCGA CCATCAGCAA TCTGCGCAGC
GTCGACTGGC AGAGCCTCGG CATCAATTTC GTGCTGGTGT TCTCGCCCAA TACGTTTCGT
GGCGCGCCGC ACACCCATAT CGCCACCCTG ACCGAACACG GCAGCACGAC AGAGAGCGAC
GCGGCCCTGA TCAAGCAGGT GGCCGACAGA TTCCCGATGG TGACCAGCGT CCGCGTCCGC
GAAGCGCTCG AGACCGTCGG CGGCGTGGTC GGCAATCTGG CGCTGGCGGT GCGGGGCGCC
AGCTCGGTGA CGCTGATCTC GGCGATCCTG GTGCTGGGCG GCGCACTCGC CGCCGGCCAC
CGCCACCGCG TCTATGACGC CGTGATCCTG AAAACGCTCG GGGCCACCCG CGGCCGGCTG
ATCGGGGCCT TCGCGCTCGA ATACATGATG ATCGGGCTCG CCACCGCGGT GTTTGGGGTG
ATCGCCGGCT CCGCCGCCGC GTGGCTGATT GTCACACGAC TGATGTCGCT GAGCTTCGCC
TGGCAGGCCG GCTCCGCCGC CGGCGTGGTG GTGGCCGCCC TGGTGGTGAC GGTCGGCCTC
GGCCTGGTGG GGACGCTGCT GGCGCTGAAC CAGAAGCCCG CCTCCGTCCT GCGGAATCTG
TAG
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| Protein sequence | MTLVADPLAR SAPPSRGWSL PLRYALREMR GGLNGFYVFI ACIALGVMAI AGVGSVAASL
GEGLAREGRT LLGGDVAFSL IQREATPQEL GYLRDRAPVS VAASMRGMAR TAEGASALVE
IKAVDSLYPM LGELKLDPPL PLADVLAKRD GAFGAAADAA FLARLDLKIG DRVSVGSAAF
QIRSVVASEP DKLAGNPGFG PRFLISEDAL RATQLLQPGS LVRWIYRVRL PDNRADDKAA
QDFADATRAA LPQAGWEIRS RGNASPQLER TITRFTQFLT LVGLAALLVG GVGVANAVKS
HIDRRRDVIA SLKALGATGR DVFAIYLTQV LVLATIGSLI GLALGAALPF LIVGAFGTLL
PLPVVAALHP GELILSLVYG LLTALAFGLW PLAQVRDVPV ATLFREAATA DAHRPSLRHI
VWIGAVIALL LAVVIGLAYD KRVAIAFVVA AVLVFLLLRG VAAGLMAIAR RLPRSRITML
RLAIANIHRP GALTPSVVLS LGLGLSVLVT IAQIDGNLRR QFLAALPERA PTFFFIDIPS
SETEQFGAFL KQAAPNATVE DVPMLRGRIV AARGVRAEDL KPGQDAEWVL QSDRGLTYAA
EMPPGSKVVE GHWWPKDYDG KPLVSFEKKL ADGLGLKIGD EVTVNVLGRE LTATISNLRS
VDWQSLGINF VLVFSPNTFR GAPHTHIATL TEHGSTTESD AALIKQVADR FPMVTSVRVR
EALETVGGVV GNLALAVRGA SSVTLISAIL VLGGALAAGH RHRVYDAVIL KTLGATRGRL
IGAFALEYMM IGLATAVFGV IAGSAAAWLI VTRLMSLSFA WQAGSAAGVV VAALVVTVGL
GLVGTLLALN QKPASVLRNL
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