| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0283 |
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| Symbol | |
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| ID | 3907911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 320215 |
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| End bp | 320781 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882166 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_483905 |
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| Protein GI | 86747409 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0277228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGTT TGTTCACTGG ACTGGAGATT CCCGCCGACG TCACCCGGAC CCTGTCTCAT
CTCCGCGGCG GCCTGCCCGG CGCGCGCTGG GTCGATCCGG AAAACTATCA CCTCACGCTG
CGCTTCATCG GCGACATCGA CGGTGTCACC GCCAACGAAA TCGCCTCGAC GCTGTTTCGG
ATCAACCGCA AACCGTTCGA CGTGCAATTG CAGGGGCTGG CGAGCTTCGG CGGCCGCAAG
CCGCGCGCGG TGGTGGCGTC GGTGGTGCCG TCGAAACCTT TAGTCGAACT GCAGGCCGAA
CTGGAGCGGC TGCTGCGGCG GGTCGGGCTC GATCCCGAAG GCCGCAAATT CACCCCGCAC
GTCACGCTGG CCTGGCTGCG CGACGCCTCC TGCCAGGACG TCGCCGATTA TCTGTCGCTC
CGCGGCTATT TCCCCGCCAA GGTGTTCAAG GCCGAGCGCT TCGTGCTGTA TTCGTCCCGC
GCCTCGACCG GCGGCGGGCC GTATGTGGTC GAGGCGCCGT ACGCGCTCAA ACACACCGAA
GAGACAAGGG CCGTCCGAAC TGCATAG
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| Protein sequence | MPRLFTGLEI PADVTRTLSH LRGGLPGARW VDPENYHLTL RFIGDIDGVT ANEIASTLFR
INRKPFDVQL QGLASFGGRK PRAVVASVVP SKPLVELQAE LERLLRRVGL DPEGRKFTPH
VTLAWLRDAS CQDVADYLSL RGYFPAKVFK AERFVLYSSR ASTGGGPYVV EAPYALKHTE
ETRAVRTA
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