| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0275 |
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| Symbol | |
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| ID | 3907903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 309947 |
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| End bp | 310693 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882158 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_483897 |
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| Protein GI | 86747401 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.464003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GCGTCGTCGT CATCACCGGA GGCAGCCGCG GCATCGGCCG CGCCACCGCG
CTCGCCGCTG CGGCCCGCGG CTTCAAGGTC GTGGTCGGCT ACGCCAGCAA TGCGGAGGCG
GCGCAGGAGA CCGTGTCGGC GATCGAGGCC AGCAACGGCC GGGCGATCGC GGTGAAATGC
GACGTCGGCG ACGAGGCGGA TATCATTGCT TTGTTCGAGG CCGCCGACAA ATTCGGGACG
CTCGGCGCGC TGGTCAACAA TGCCGGCATC GTCGGCCCGA CCGCGCGGGT CGACGAGATG
TCGGCGGAGC GCATCCAGCG GATGATGGCG GTCAACGTCA CGGGCAGCAT CCTGTGCGCG
CGCGAGGCGG TGAAGCGGTT GTCGACCCGG CACGGCGGCC CCGGCGGCGT GATCATCAAT
CTGTCGTCGG TCGCAGCCAA ACTCGGATCG CCGAATACTT ACGTTGACTA CGCCGCTTCC
AAGGGCGCGA TCGATTCCTT CACTATCGGG CTCGGCCATG AGGTCGCCGG CGAAGGCATT
CGCGTCGCCG CGATCCGCCC CGGCCTGATC GACACCGAGA TCCACGCCTC CGGCGGCGAT
CCGGACCGCG CCCACCGGCT CAGCGGCCAT GTGCCGATGC AGCGCGTCGG CCGCGCCGAG
GAAATCGCCA ACGCCGTGGT CTGGCTGATG TCGGACGAAG CCTCCTACGT CACCAGCGCC
ATCATCGATG TCTCGGGCGG ACGATAG
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| Protein sequence | MNDRVVVITG GSRGIGRATA LAAAARGFKV VVGYASNAEA AQETVSAIEA SNGRAIAVKC
DVGDEADIIA LFEAADKFGT LGALVNNAGI VGPTARVDEM SAERIQRMMA VNVTGSILCA
REAVKRLSTR HGGPGGVIIN LSSVAAKLGS PNTYVDYAAS KGAIDSFTIG LGHEVAGEGI
RVAAIRPGLI DTEIHASGGD PDRAHRLSGH VPMQRVGRAE EIANAVVWLM SDEASYVTSA
IIDVSGGR
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