| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0267 |
|---|
| Symbol | |
|---|
| ID | 3907895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 300452 |
|---|
| End bp | 301984 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637882150 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_483889 |
|---|
| Protein GI | 86747393 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.686525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCGCCGCGGA AATTTCCGCG ATCCTCAAGG ACCAGATCAA GAACTTCGGT
CAGGAAGCCG AAGTCACCGA AGTCGGACAG GTGCTGTCCG TCGGCGACGG CATTGCCCGC
GTCTACGGTC TGGACAACGT CCAGGCCGGT GAAATGGTCG AGTTCGAGAA CGGCACGCGC
GGCATGGCGC TGAACCTCGA AACCGACAAT GTCGGCGTCG TGATCTTCGG CGCCGACCGC
GAGATCAAGG AAGGCCAGAC CGTCAAGCGC ACCCGCTCGA TCGTCGACAC GCCGGTCGGC
AAGGGCCTGC TCGGCCGCGT CGTCGACGCG CTCGGCAATC CGATCGACGG CAAGGGTCCG
ATCCAGGCGA CCGAGCGCAA GCGCGTCGAC GTCAAGGCGC CCGGCATCAT TCCGCGCAAG
TCGGTGAACG AGCCGATGGC GACCGGCCTC AAGGCGATCG ACGCCCTGAT CCCGGTCGGC
CGCGGCCAGC GCGAGCTGAT CATCGGCGAC CGTCAGACCG GCAAGACCGC GATCGCGCTC
GACACCATCC TGAACCAGAA GCCGCTCAAC GTCGAAGGCG CGCCGGAAGG CCAGAAGCTG
TACTGCGTCT ACGTCGCGGT CGGCCAGAAG CGCTCGACTG TCGCGCAGTT CGTCAAGGTG
CTGGAAGAGC AGGGCGCGCT CGAATATTCG ATCGTCGTCG CCGCCACCGC CTCCGATCCG
GCACCGATGC AGTACATCGC GCCGTTCACC GGCTGCACCA TGGGCGAATA CTTCCGCGAC
AACGGCATGC ACGCCGTCAT CATCTATGAC GATCTGTCCA AGCAGGCCGT CGCCTATCGC
CAGATGTCGC TGTTGCTGCG CCGCCCGCCG GGCCGCGAAG CCTATCCGGG CGACGTGTTC
TATCTGCACT CCCGCCTGCT CGAGCGCGCC GCCAAGCTGA ACGACGATCA CGGCGCCGGC
TCGCTGACCG CGCTGCCGGT GATCGAAACC CAGGCCAACG ACGTCTCGGC CTACATTCCG
ACCAACGTGA TTTCGATCAC CGACGGCCAG ATCTTTCTGG AAACCGATCT GTTCTTCCAG
GGCATCCGCC CGGCGGTGAA CGTCGGTCTG TCGGTGTCGC GCGTCGGATC GTCGGCGCAG
ACCAAGGCGA TGAAGAAGGT CGCCGGCAAG ATCAAGGGCG AGCTCGCGCA GTACCGCGAA
ATGGCGGCGT TCGCGCAGTT CGGCTCCGAT CTCGACGCCT CGACCCAGCG CCTGCTGAAC
CGCGGTGCCC GCCTGACCGA ACTCCTGAAG CAGCCGCAGT TCTCGCCGCT GAAGATGGAA
GAGCAGGTCG TGGTGATCTA CGCCGGCGTC AACGGCTATC TCGATGCGCT GCCGGTCGCC
AAGGTGCGCG CCTTCGAGGA CGGCCTGCTG TCGCTCCTGC GCGGCAAGGA AGTCGGCATT
CTCGATGCGA TCCGCACCAG CCGCGATCTC TCCGACGACA CCGCCGCCAA GCTCAAGGCG
GTCGTCGAGA GCTACGCCAA GACGTTCGCG TAA
|
|---|
| Protein sequence | MDIRAAEISA ILKDQIKNFG QEAEVTEVGQ VLSVGDGIAR VYGLDNVQAG EMVEFENGTR
GMALNLETDN VGVVIFGADR EIKEGQTVKR TRSIVDTPVG KGLLGRVVDA LGNPIDGKGP
IQATERKRVD VKAPGIIPRK SVNEPMATGL KAIDALIPVG RGQRELIIGD RQTGKTAIAL
DTILNQKPLN VEGAPEGQKL YCVYVAVGQK RSTVAQFVKV LEEQGALEYS IVVAATASDP
APMQYIAPFT GCTMGEYFRD NGMHAVIIYD DLSKQAVAYR QMSLLLRRPP GREAYPGDVF
YLHSRLLERA AKLNDDHGAG SLTALPVIET QANDVSAYIP TNVISITDGQ IFLETDLFFQ
GIRPAVNVGL SVSRVGSSAQ TKAMKKVAGK IKGELAQYRE MAAFAQFGSD LDASTQRLLN
RGARLTELLK QPQFSPLKME EQVVVIYAGV NGYLDALPVA KVRAFEDGLL SLLRGKEVGI
LDAIRTSRDL SDDTAAKLKA VVESYAKTFA
|
|---|
| |