Gene RPB_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0265 
Symbol 
ID3907893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp297934 
End bp299364 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content66% 
IMG OID637882148 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_483887 
Protein GI86747391 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.615567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAC CCGCCAATCA GACCGGACGC ATCACCCAGG TCATCGGCGC CGTCGTCGAC 
GTGCAGTTCG AAGGCCATCT GCCGGCCATT CTGAACGCGA TCGAGACCAA GAACGGCGAC
AACCGCCTGG TGCTCGAAGT CGCCCAGCAT CTCGGCGAAT CGACCGTCCG CACCATCGCG
ATGGACACCA CCGAGGGTCT GGTCCGCGGC CAGGAAGTCA CCGACACCGG CAACCCGATC
ATGGTGCCGG TCGGCGTCGG CACGCTCGGC CGCATCATGA ACGTGATCGG CGAGCCGGTC
GACGAGCAGG GCCCGGTCGC CAATGAGGGT CTGCGTCCGA TCCACGCGGA AGCCCCGACC
TACACCGACC AGTCGACCGA AGCGGAAATC CTCGTCACCG GCATCAAGGT CGTCGACCTG
CTGGCGCCCT ACGCCAAGGG CGGCAAGATC GGCCTGTTCG GCGGCGCCGG CGTCGGCAAG
ACCGTGCTGA TCCAGGAACT GATCAATAAC GTCGCCAAGG CCCACGGCGG CTACTCGGTG
TTCGCCGGCG TCGGCGAGCG CACCCGCGAA GGCAACGACC TCTACCACGA GTTCATCGAA
TCCGGCGTCA ACAAGAAGGG CGGCGGCGAA GGCTCGAAAT GCGCCCTCGT TTACGGCCAG
ATGAACGAGC CGCCGGGCGC CCGCGCCCGC GTCGCGCTGT CGGGTCTGAC CGTCGCCGAG
CATTTCCGCG ACCAGGGCCA GGACGTGCTG TTCTTCGTCG ACAACATCTT CCGCTTCACC
CAGGCCGGCT CGGAAGTGTC GGCGCTGCTC GGCCGTATTC CTTCGGCGGT GGGCTATCAG
CCGACGCTCG CCACCGACAT GGGCGCGCTG CAGGAGCGCA TCACCACCAC CCATAAGGGC
TCGATCACGT CGGTGCAGGC GATCTACGTG CCGGCCGACG ATTTGACCGA CCCGGCGCCC
GCCACCTCGT TCGCGCATCT TGACGCGACC ACCGTGCTCA ACCGCGCGAT CTCGGAAAAG
GGCATCTATC CGGCGGTCGA CCCGCTCGAC TCGACCTCGC GCATGCTCTC CCCGCTGATC
GTCGGCGAGG AGCACTACCA GACCGCCCGT ATGGTCCAGC AGGTGCTGCA GAAGTACAAG
TCGCTGCAGG ACATCATCGC GATTCTCGGG ATGGACGAAC TGTCCGAAGA GGACAAGCTC
GCCGTCGCCC GCGCCCGCAA GATCGAGCGC TTCCTGTCAC AGCCGTTCTT CGTCGCCGAA
ATCTTCACCG GCTCGCCGGG CAAGTTCGTC GACCTCGCCG ACACCATCAA GGGCTTCCGC
GCGATCTGCG AAGGCAAGTA TGATCACCTC CCGGAGGCCG CCTTCTACAT GGTCGGCGCC
ATCGAAGAGG CGGTCGAAAA GGGCAAGAAG CTGGCCGCGG AAGCGGCCTG A
 
Protein sequence
MATPANQTGR ITQVIGAVVD VQFEGHLPAI LNAIETKNGD NRLVLEVAQH LGESTVRTIA 
MDTTEGLVRG QEVTDTGNPI MVPVGVGTLG RIMNVIGEPV DEQGPVANEG LRPIHAEAPT
YTDQSTEAEI LVTGIKVVDL LAPYAKGGKI GLFGGAGVGK TVLIQELINN VAKAHGGYSV
FAGVGERTRE GNDLYHEFIE SGVNKKGGGE GSKCALVYGQ MNEPPGARAR VALSGLTVAE
HFRDQGQDVL FFVDNIFRFT QAGSEVSALL GRIPSAVGYQ PTLATDMGAL QERITTTHKG
SITSVQAIYV PADDLTDPAP ATSFAHLDAT TVLNRAISEK GIYPAVDPLD STSRMLSPLI
VGEEHYQTAR MVQQVLQKYK SLQDIIAILG MDELSEEDKL AVARARKIER FLSQPFFVAE
IFTGSPGKFV DLADTIKGFR AICEGKYDHL PEAAFYMVGA IEEAVEKGKK LAAEAA