Gene RPB_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0260 
Symbol 
ID3907888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp293834 
End bp294337 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID637882143 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_483882 
Protein GI86747386 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCT ACGAAGACCT GCCCTATCGA ACATGCGTCG GCATGATGCT GATCAACCGG 
GCGGGTCTCG TCTTCATCGG GCGCCGCGCC GGCGGCATCG AGCATGTCGA CGACACCCAC
GTCTGGCAGA TGCCGCAGGG CGGCGTCGAT CCCGGCGAGG ACACTTGGGA AGCCGCCAAG
CGCGAGCTGT ACGAGGAGAC CAACGTCCGT TCGGTGGAGA AGATCGCCGA GGTGCCCGAC
TGGCTGATCT ACGACATCCC GCGCACCGTC GCGGGCCGTG CCTGGAAAGG CCGCTATCGC
GGCCAGCGCC AGAAATGGTT CGCGATCCGC TTCACCGGCC AGGACTCCGA GATCGACATC
ATTGCGCCCC CGGGTCACAA ATCCGAATTC ACCAGCTGGC GTTGGGAGCC GATGCTGAAT
CTGCCCGACC TGATCGTTCC GTTCAAACGC CCGGTCTATG AGCGCGTGGT GAAGGAATTC
TCGCAGCTCG CCATCGCGGT CTGA
 
Protein sequence
MARYEDLPYR TCVGMMLINR AGLVFIGRRA GGIEHVDDTH VWQMPQGGVD PGEDTWEAAK 
RELYEETNVR SVEKIAEVPD WLIYDIPRTV AGRAWKGRYR GQRQKWFAIR FTGQDSEIDI
IAPPGHKSEF TSWRWEPMLN LPDLIVPFKR PVYERVVKEF SQLAIAV