| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0258 |
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| Symbol | |
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| ID | 3907886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 290963 |
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| End bp | 292336 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882141 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_483880 |
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| Protein GI | 86747384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA AGACTTCGGT AATCCTCCTC AGCGCCGTTA CCGGTGCCGC GCTGACACTT
TTCGTCACCC AGCCCCGTTC GGTGCTGATG GGCTCGACCG CGCGCGCTGC GACGTCTGAT
ACTTACCGTC AGCTCAATTT GTTCGGCGAC GTGTTCGAGC GGGTCCGCAG CGACTATGTC
GAGAAGCCCG ACGACAGCAA GCTGATCGAA TCCTCGATCA GCGGCATGCT CACCGGGCTC
GATCCGCATT CGAGCTACAT GGATGCCAAG AGCTTCCGCG ACATGCAGGT GCAGACCCGC
GGCGAGTTCG GCGGTCTCGG CATCGAGGTC ACGATGGAAG ATGGCCTGAT CAAGGTGGTG
TCGCCGATCG ACGACACCCC GGCGTCGAAA GCCGGCATCA TGGCCAATGA CATCATCACC
AATCTGGACG ACGAGGCGGT GCAGGGTCTG ACCCTGAACC AGGCCGTCGA GAAGATGCGC
GGACCGGTCA ATACCAAGAT CCGGCTGAAG ATCATGCGCA AGGGCCAGGA CAATCCGATC
GAGGTCACGC TGGTGCGCGA CAACATCCGG GTCCGGTCGG TGCGCGCGCG CGTCGAGTCC
GACGACATCG GCTACATCCG CATCACCACC TTCAACGAGC AGACCACCGA GGGCCTGAAG
CGGGAGATCG CCAATCTCAC CAAGCAGATC GGCGCCGACA AGCTGAAGGG CTTCATTCTC
GACCTGCGCA ACAATCCGGG CGGCCTGCTC GAGGAAGCGG TGACGGTCTC CGACACCTTC
CTCGATCGCG GCGAGATCGT CTCGACGCGC GGCCGCAACG CCGAGGAAAC CCAGCGCCGC
TCCGCTCATG CCGGCGACCT CACCAAGGGC AAGCCGGTGA TGGTGCTGAT CAACGGTGGC
TCGGCCTCGG CCTCGGAAAT CGTCGCCGGC GCGTTGCAGG ACCACAAGCG CGCGACGCTG
ATCGGCACCC GTTCGTTCGG CAAGGGCTCG GTGCAGACCA TCATCCCGCT CGGAAGCGGA
AACGGTGCGC TGCGGCTCAC CACCGCGCGC TACTACACGC CGTCGGGCAA GTCGATCCAG
GCCAAGGGCA TCACCCCGGA CATCGAAGTG CTGCAGGACG TGCCGGACGA TCTCAAGGCC
CGCACCGACA CCAAGGGCGA GGCCTCGCTG CGCGGCCATC TGAAGGGCCA GGACGGCGAC
GAGAAGACCG GCTCGCAGTC CTACGTGCCG CCGGAGGCCA AGGACGACAA GGCGCTGAAG
ACCGCCGCCG ATCTGCTGCA CGGCATCAAG GCGACCGCCA CTACGCCGAC GGCGCCGGTC
ACCGGCGAGA AGGCGGCGAT CGACAAGCCG GCCGGCAACA AGGCCGCGAA CTGA
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| Protein sequence | MMRKTSVILL SAVTGAALTL FVTQPRSVLM GSTARAATSD TYRQLNLFGD VFERVRSDYV
EKPDDSKLIE SSISGMLTGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLIKVV
SPIDDTPASK AGIMANDIIT NLDDEAVQGL TLNQAVEKMR GPVNTKIRLK IMRKGQDNPI
EVTLVRDNIR VRSVRARVES DDIGYIRITT FNEQTTEGLK REIANLTKQI GADKLKGFIL
DLRNNPGGLL EEAVTVSDTF LDRGEIVSTR GRNAEETQRR SAHAGDLTKG KPVMVLINGG
SASASEIVAG ALQDHKRATL IGTRSFGKGS VQTIIPLGSG NGALRLTTAR YYTPSGKSIQ
AKGITPDIEV LQDVPDDLKA RTDTKGEASL RGHLKGQDGD EKTGSQSYVP PEAKDDKALK
TAADLLHGIK ATATTPTAPV TGEKAAIDKP AGNKAAN
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