| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0241 |
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| Symbol | |
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| ID | 3907868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 273416 |
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| End bp | 275425 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637882123 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_483863 |
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| Protein GI | 86747367 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.515417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACCA ATCCTGATAT CGTCAAGGCG ATCTTCGGCC GGCTGTCTCT GGAATCGCTG
CCGTTGCACG AGCCGATCGT CGTCCTCACC TTCGTGGCGG TCGCGCTCGG CGGCGCCGCT
CTGGTCGCGG GCCTGACCTA TTTCAAGCTG TGGGGCTATC TGTGGCGCGA GTGGTTCACC
ACCGTCGACC ACAAGCGCAT CGGCATCATG TACATGATCC TCGGCATCGT CATGCTGCTG
CGCGGCTTCG CCGACGCGGT GATGATGCGG GCCCAGCAGG CGATGGCCTT CAACGGCTCC
GAGGGCTATC TCAACGCGCA TCACTACGAT CAGGTGTTCA CCGCCCACGG CGTGATCATG
ATCTTCTTCG TGGCGATGCC GATGGTCACC GGCCTGATGA ACTACGTCGT GCCGCTGCAG
ATCGGCGCCC GCGACGTGTC GTTCCCGTTC CTGAACAATT TCAGCTTCTG GATGACGACT
GCCGGCGCCG TGCTGGTGAT GATCTCGCTG TTCGTCGGCG AGTTCGCCCG CACCGGCTGG
CTGGCCTATC CGCCGCTGTC GAACATCGGT TACAGTCCGG ACGTCGGCGT TGACTACTAC
ATCTGGGCGC TGCAGGTCGC GGGCGTCGGA ACCACATTGT CCGGCGTCAA CCTGATCTGC
ACCATCGTCA AGGTGCGGGC GCCCGGCATG ACCATGATGC GGATGCCGAT CTTCACCTGG
ACCTCGCTCT GCACCAACAT CCTGATCGTC GCCTCGTTTC CGGTTCTGAC CGTAGTGCTG
GCGCTGCTGT CGCTCGATCG TTACGTCGGC ACCAATTTCT TCACGAACGA CTTCGGCGGC
AACCCGATGA TGTACGTGAA CCTGATCTGG ATCTGGGGCC ATCCGGAGGT CTACATCCTG
ATCCTGCCGG CCTTCGGGAT CTTCTCCGAA GTCACCTCGA CGTTCTCCGG CAAGCGGCTG
TTCGGCTACA CCTCGATGGT CTACGCCACG GTGGTCATCA CCATCCTGTC GTACCTGGTG
TGGTTGCACC ATTTCTTCAC GATGGGCTCG GGCGCCAGCG TCAACTCGTT CTTCGGCATT
ACCACGATGA TCATCTCGAT CCCGACGGGC GCGAAGATGT TCAACTGGCT GTTCACGATG
TACCGCGGCC GGATCCGTTA CGACCTGCCG ATGATGTGGA CGATCGCATT CATGCTGACC
TTCGTGATCG GCGGCATGAC CGGGGTGCTG CTCGCGGTGC CGCCGGCCGA CTTCGTGCTG
CACAACAGCC TGTTCCTGGT CGCGCATTTC CACAATGTCA TCATCGGCGG CGTGGTGTTC
GGCCTGTTCG CCGGCATCGC CTACTGGTTC CCGAAGGCGT TCGGCTTCAA GCTCGACGTG
TTCTGGGGCA AGATCTCGTT CTGGTGCTGG GTGGTCGGCT TCTACTTCGC CTTCATGCCG
CTCTACGTGC TGGGCCTGAT GGGCGTCACC CGTCGTCTGC GGGTGTTCGA CGACCCCAGC
CTGCAGATCT GGTTCATCAT CGCCGGCTTC GGCGCGTTCC TGATCCTGAT CGGCATCGTC
GCGTTCCTGA TCCAGATCGC CGTCAGCGTG ATGCGACGCG AGCAGCTTCG CGACGTCACC
GGCGACCCTT GGAACGGCCG CACGCTGGAA TGGGCGACGT CGTCGCCGCC GCCGGACTAC
AACTTCGCCT TCACGCCGAT GGTGCGCGAT TCCGATGCGT GGTGGGACAT GAAAAAGGCT
GGCTACAAGC GTCCGCTCGA AGGCTTCAAG CCGATCCACA TGCCGAGCAA TACCGGCACC
GGAATCATCC TGTCCGGGCT GAGCATGGTG ATGGCGTTCG GCTTGATCTG GTACATCTGG
TGGCTGGCGG CGCTGTCCTT CATCGCGCTG CTCGCCGTCG CGATCGGCCA CACCTTCAAT
TATCACCGCG ACTTCCACAT CCCCGCCGAA GAGGTGGTTC GCGTCGAGGA CGAGCGGACG
CGACTGCTCG CCGAGGGAGC CAAGCCATGA
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| Protein sequence | MLTNPDIVKA IFGRLSLESL PLHEPIVVLT FVAVALGGAA LVAGLTYFKL WGYLWREWFT
TVDHKRIGIM YMILGIVMLL RGFADAVMMR AQQAMAFNGS EGYLNAHHYD QVFTAHGVIM
IFFVAMPMVT GLMNYVVPLQ IGARDVSFPF LNNFSFWMTT AGAVLVMISL FVGEFARTGW
LAYPPLSNIG YSPDVGVDYY IWALQVAGVG TTLSGVNLIC TIVKVRAPGM TMMRMPIFTW
TSLCTNILIV ASFPVLTVVL ALLSLDRYVG TNFFTNDFGG NPMMYVNLIW IWGHPEVYIL
ILPAFGIFSE VTSTFSGKRL FGYTSMVYAT VVITILSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKMFNWLFTM YRGRIRYDLP MMWTIAFMLT FVIGGMTGVL LAVPPADFVL
HNSLFLVAHF HNVIIGGVVF GLFAGIAYWF PKAFGFKLDV FWGKISFWCW VVGFYFAFMP
LYVLGLMGVT RRLRVFDDPS LQIWFIIAGF GAFLILIGIV AFLIQIAVSV MRREQLRDVT
GDPWNGRTLE WATSSPPPDY NFAFTPMVRD SDAWWDMKKA GYKRPLEGFK PIHMPSNTGT
GIILSGLSMV MAFGLIWYIW WLAALSFIAL LAVAIGHTFN YHRDFHIPAE EVVRVEDERT
RLLAEGAKP
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