Gene RPB_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0238 
Symbol 
ID3907865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp271551 
End bp272387 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID637882120 
ProductSurfeit protein 
Protein accessionYP_483860 
Protein GI86747364 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCCG ACAGCGATCC GGCGGGAAGC GGCCGCAGCT CCGCGCGGCG ACCGTCGTTG 
TGGCTCACGA TCCCTGCCGT TGCGGCCGTG GCCGGACTGA TCGCGCTCGG CGTCTGGCAG
ATCGAGCGGC GTGCCTGGAA ACTGGCCCTG ATCGACCGCG TCGAGCAGCG CGCGCATGCT
GCACCGACTG CGTTGCCCCC CGCCGCGTCC TGGCCCGAAG TGACCGCCGC CCGCGACGAA
TATCGGCGCG TCACCGTGAC CGGCCGCTTC CTGCACGACC GCGAGACGCT GGTGCAGGCG
GTCACCGATT TCGGCGGCGG CTTCTGGGCG ATCACGCCGC TGCGCACCGA CGACGGCCGC
AACGTGCTGA TCAATCGCGG CTTCGTTCCG CCCGACTGGC GAGATCGGGC GACGCGCAGC
GCCGGCGCGC CTGCCGGCGA GATCACGGTT AACGGTCTGT TGCGCGTGAC GGAACCCGGC
GGTGGCTTCC TGCGGCACAA CGAGCCCGCC GCCGATCGCT GGTATTCACG CGACGTCGCG
GCGATCGCAC AGACGCGAAG CGTCGCGAAT GTCGCACCTT TCTTCATCGA CGCCGACGCA
TCGTTCAACC TGGAAGGGCA GCCGATCGGT GGCCTGACCG TGATTCGGTT CCCCAACAAC
CACCTGGTCT ACGCGCTCAC GTGGTTTTGC CTGGCATTTA TGCTGGCCGG CTGGCTTGTT
GTCGCCTTCG GTGCCGGGTC ATTCCGCCGC GCAGGCGGTG GCCGGAGGCC GGGCCAAGAG
GCGCAATCCG CCCTTGCAAC AGGATCACAT GCTGGACCGA TCTCCGGGCA CCGTTGA
 
Protein sequence
MTPDSDPAGS GRSSARRPSL WLTIPAVAAV AGLIALGVWQ IERRAWKLAL IDRVEQRAHA 
APTALPPAAS WPEVTAARDE YRRVTVTGRF LHDRETLVQA VTDFGGGFWA ITPLRTDDGR
NVLINRGFVP PDWRDRATRS AGAPAGEITV NGLLRVTEPG GGFLRHNEPA ADRWYSRDVA
AIAQTRSVAN VAPFFIDADA SFNLEGQPIG GLTVIRFPNN HLVYALTWFC LAFMLAGWLV
VAFGAGSFRR AGGGRRPGQE AQSALATGSH AGPISGHR