Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0220 |
Symbol | |
ID | 3909462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 248432 |
End bp | 249847 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882102 |
Product | amidase |
Protein accession | YP_483842 |
Protein GI | 86747346 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.855119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGA CCGATCCGGC ATTGCTGTCG CTGACCGAAA TCGCGCAGGC GATCGCTGCG AAGACAGTCT CCTCGCGCGA GGTGACGCAG GCCTGCCTCG ATCGCATCGC GGCCCAGCAG CCGCGGCTCA ACGCCTTCAT GTCGATCGAA GCCGACAGCG CGCTCGCCGC CGCGGATGCC GCAGACGCGG AGCTGGCGCG CGGCGACAGT CGCGGCGTGC TGCACGGCGT GCCGCTCGCG CACAAGGACA TGTACTACGA GACGGGTCAC GTCGTGACCT GCGGCTCGAA GATCCGGCAG GACGACGTCG CGACCACGAC CTCGACCGCG CTGCAGCGGC TGAAGGATGC CGGCACGGTT CGGCTGGGCT CGTTGCAGAT GTCGGAATTC GCCTATGGGC CGACCGGCCA CAACGCGCAT TTCGGCCCGG TGCATAATCC TTGGAACATC GATCACATCA CCGGCGGTTC GTCGTCGGGC TCCGGTGCGG CCGTCGCGGC GCGGCTGACG TTTGCGGCGC TCGGCTCCGA CACCGGAGGA TCGATCCGGA TGCCGGCGCA TTTCTGCGGC GTCACCGGGC TGAAGACCAC GGTCGGCCGC GTCAGCCGCG CCGGCGCGAT GCCGCTGTCG CAGTCGCTCG ACACCGTCGG GCCGCTGGCG CGCACCGCGC AGGATTGCGC GCTCCTGCTC GGGCTGATGG CCGGGGCCGA CCCGGAGGAT CTGACCTGCA TCGCCGGCGA ACTGCCGGAC TATCTCGCGG CGACGCACGC GCCGATGCGC GGCGCGCGGA TCGGGATTCC GAAGGCGTTC TATGTCGACG ACCTCGATCC TGAAGTGGCG CGCGTGCTCG ACGAGACCAT CGCCACGCTC AGGGCCGAAG GCGCCAGCGT GGTCGAGGTC GATCTGCCCG ACCAGCCGCA ATTGACCGCG GCGTGCCAGC TTGTGCTCGC GGTGGAAGCC GCCGCGTTCC ACAAGCGCTG GATGATCGAA CGGCCGCAGG ATTACGGCCC GCAGGTGCTG ATGCGGCTGC AGAACGGCCT CGGCGTGCCG GCGATTTCCT ATCTCGAGGC GATGCGCTGG CGCGGGCCGG CACTGTCGGC GCATCTCGCC GCGGTCGCCG ATGTCGATGC CGTGCTGGCG CCGGTGGCTC CGGTGCCGGC CCCGACGATC GCGGAGAGCG ACGTCGGTAG CAGCCTGAAC GCCGAAGCGG TGATCCAGCG GCTGACGCGC TTCACCCGGC CGATCAACTA TCTGGGCCTG CCGTCGCTGG CGATTCCGAC GGGCTTCAGC GCCAGCGGCC TGCCGATCGG GCTGCAACTG ATCGGGCGCC CGTTCGACGA GGCGATGATC CTGCGGATCG GCGCGGCGTT CCAGCGCGTC ACTGAATTCC ACAACAAGAT GCCGGCGTCA GCATGA
|
Protein sequence | MSTTDPALLS LTEIAQAIAA KTVSSREVTQ ACLDRIAAQQ PRLNAFMSIE ADSALAAADA ADAELARGDS RGVLHGVPLA HKDMYYETGH VVTCGSKIRQ DDVATTTSTA LQRLKDAGTV RLGSLQMSEF AYGPTGHNAH FGPVHNPWNI DHITGGSSSG SGAAVAARLT FAALGSDTGG SIRMPAHFCG VTGLKTTVGR VSRAGAMPLS QSLDTVGPLA RTAQDCALLL GLMAGADPED LTCIAGELPD YLAATHAPMR GARIGIPKAF YVDDLDPEVA RVLDETIATL RAEGASVVEV DLPDQPQLTA ACQLVLAVEA AAFHKRWMIE RPQDYGPQVL MRLQNGLGVP AISYLEAMRW RGPALSAHLA AVADVDAVLA PVAPVPAPTI AESDVGSSLN AEAVIQRLTR FTRPINYLGL PSLAIPTGFS ASGLPIGLQL IGRPFDEAMI LRIGAAFQRV TEFHNKMPAS A
|
| |