| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0204 |
|---|
| Symbol | |
|---|
| ID | 3909445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 228221 |
|---|
| End bp | 230614 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637882085 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_483826 |
|---|
| Protein GI | 86747330 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.116125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAGC AGCGGCCGGA CGGCATCCGA GCGTACGAAG ATCCCGCTGG CGGATGGGGC
GCGCTGAAGG CACTCGCCGT CGCGCTCAAG GATCAACAGC TCGTCGTCGA GGGCATTCCA
ACTCTGTTGA AGCAGAATCA GCCGGAAGGT TTCGATTGTC CCGGCTGCGC CTGGCCCGAT
CCGAAGCACA CCTCCGCGTT CGAGTTCTGC GAGAACGGGG CCAAGGCCGT GACCTGGGAG
TCGACGCCGA AGCGGGTCGG CCCGGACTTC TTTGCGCAGC ATACGGTGAC GTCGCTGTGG
GAGTGCTCGG ACTACTGGCT CGAGGATCAG GGGCGGTTGA CCCATCCGAT GCGCTACGAT
GCGCAGACCG ACAAATACGA GCCGGTCGAC TGGCAGGTCG CGTTCGACGA CATCGCCGCC
AAGCTCGATG CGCTCGACGA TCCCAACCAG CTCGAGCTCT ATACGTCCGG ACGGGCGTCG
AACGAGGCGG CCTTCCTGTT CCAGTTGTTC GGCCGCCAGT TCGGCACCAA CAACTTTCCG
GATTGCTCGA ACATGTGCCA CGAGCCGACC TCGGTCGGGT TACCGCGCTC GATCGGCATC
GGCAAGGGCA CGGTCACGCT CGACGATTTC GACAAGGCCG AGCTGATCAT CTCGATGGGC
CACAACCCCG GGACCAATCA TCCGCGGATG ATGACGCCGT TGCGCAATGC CTCGCGGCGC
GGCGTCAAGA TCATCGTGCT CAATCCGCTG AAGGAGCGGG CGCTGGAGCG CTTCGAGGCG
CCGCAGGCAC CGCTCGAAAT GGCGACGACA TCGTCGACGC CGATCGCTTC CTGCTACTTC
CAGGTCAAGG TCGGCGGTGA TGCCGCAGCC CTGAAAGGCA TCTGCAAGGC GCTGGTCGCC
GCCGACAAGG TGGCGCGCGC CGCGGATCTT GCGCCCTTGC TCGACCACAC TTTCATTGTT
GGCCACACCG CAGGCTTCGA TGCCCTGGTC GACGATCTCG AAGGCTGCAG CTGGTCCGCC
ATCGAGCGGG CCAGCGGATT GCCGCGCGCC GACATGGAGC GGATCGCGGC CGACTATGCG
GCGTCGAACG CCACCATCGT GTGTTACGGC ATGGGGATCA CCCAACACGT CACCGGCACT
GCGAATGTGC AGCAGATCGC CAATCTGCTG CTGCTCAAGG GCAATATCGG CAAACCCGGC
GCCGGGATTT GTCCGTTGCG CGGCCATTCC AACGTGCAGG GCGATCGCAC CGTCGGCATC
ACCGAGCGCC CCTCGGAGGC GTTTCTCGAC CGGCTGCGCG ACGTGTTCGG CTTCGAGCCG
CCTCGGGCAT TCGGCCATTC GGTGGTCGAC AGTATCGCGG CGATGCGCGA CGGCCGCGCC
AAGGCGGTGA TCTGCCTCGG CGGCAATCTG GCGATGGCGG CATCGGACCC GCAGGCCTGC
TTCAAGGGAT TTCGCCGCCT CGATCTCGCC GTGCACCTCG CCACCAAGCT CAACCGCACG
CACCTGTTGA CCAGCAAGAC GACCTATCTG TTCCCGGTGC TCGGCCGCAC CGACAGCGAC
ATCCAGGCTT CGGGCCGCCA GGCGCTCACC GTCGAGGACT CGATGTCGAT GGTGCATGCC
TCGCGCGGCT TCCTGACCCC GCCGAGCGAT CAGGTGCGGT CCGAGGTTGC GATCCTGGCC
GGCATCGCCA AGGCGACGCT CAGAAGCAAG TCCAGGGTGG ATTGGGATGC GCTGGCCGGC
AATTACGATC TGATCCGCGA CGCCATCGAA GAAGTGTTTC CGGATTTCGA GGCTTACAAC
GACCGCATCC GAAAGCCGGG TGGATTTCAG CTGCCGAATT CGGCGGCGAT GCGGATCTGG
AACACGCCGA CCGGCAAGGC CAATTTCGCG ATCTTCGCGG GCCTCGAAGA AGACGAGACA
AGTACCGACC GCGATGTGCT GCGGATGACG TCGCTGCGCG CGCACGATCA GTACAACACC
ACGATCTATG GTCTGAACGA CCGCTACCGT GGCGTGTTCG GCCGCCGCGA CGTGCTGTTC
CTCAATCCCA AGGACCTGGC GCGGCTCGGT TTTGCGGAAG GCGACGTGGT CGATGTCGCC
ACCGCGCTGG ACTACGCGCG GCCGGACCGC GTGGTGCAGG CGCTGACCCT GGTGAGCTAC
AATCTGCCGG ACGGCTGCTG CGCCTCCTAC TATCCCGAGA TCCAGCCACT GGTGGCGCTC
GAATTCCGCG ATCCGGAGTG CCTGACGCCG TCCTACAAAT CGATCCCGGT GAAAGTCACG
GCCGCGCGGG CGCCGCTCGC CGCTGACCGC GCGGTGGGGC GTGACGGAAT CGTCGGCCGC
GAACCGGGCG TCGAGACCGC AACGGGGCCG TCGCCCGTCT CCCTCATCGA TTGA
|
|---|
| Protein sequence | MAKQRPDGIR AYEDPAGGWG ALKALAVALK DQQLVVEGIP TLLKQNQPEG FDCPGCAWPD
PKHTSAFEFC ENGAKAVTWE STPKRVGPDF FAQHTVTSLW ECSDYWLEDQ GRLTHPMRYD
AQTDKYEPVD WQVAFDDIAA KLDALDDPNQ LELYTSGRAS NEAAFLFQLF GRQFGTNNFP
DCSNMCHEPT SVGLPRSIGI GKGTVTLDDF DKAELIISMG HNPGTNHPRM MTPLRNASRR
GVKIIVLNPL KERALERFEA PQAPLEMATT SSTPIASCYF QVKVGGDAAA LKGICKALVA
ADKVARAADL APLLDHTFIV GHTAGFDALV DDLEGCSWSA IERASGLPRA DMERIAADYA
ASNATIVCYG MGITQHVTGT ANVQQIANLL LLKGNIGKPG AGICPLRGHS NVQGDRTVGI
TERPSEAFLD RLRDVFGFEP PRAFGHSVVD SIAAMRDGRA KAVICLGGNL AMAASDPQAC
FKGFRRLDLA VHLATKLNRT HLLTSKTTYL FPVLGRTDSD IQASGRQALT VEDSMSMVHA
SRGFLTPPSD QVRSEVAILA GIAKATLRSK SRVDWDALAG NYDLIRDAIE EVFPDFEAYN
DRIRKPGGFQ LPNSAAMRIW NTPTGKANFA IFAGLEEDET STDRDVLRMT SLRAHDQYNT
TIYGLNDRYR GVFGRRDVLF LNPKDLARLG FAEGDVVDVA TALDYARPDR VVQALTLVSY
NLPDGCCASY YPEIQPLVAL EFRDPECLTP SYKSIPVKVT AARAPLAADR AVGRDGIVGR
EPGVETATGP SPVSLID
|
|---|
| |