| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0203 |
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| Symbol | |
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| ID | 3909444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 226211 |
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| End bp | 227941 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882084 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_483825 |
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| Protein GI | 86747329 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0234842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG TTGCTGATCG AATTGTCGAA ACCCTGCATC AAGCCGGCGT CGAGCGGATC
TTCGGCGTGG TCGGAGACAG CCTCAACGGA CTGACGGAAG CGTTGCGCCA GCACGGCAGC
ATCGAATGGG TGCACGTTCG CCACGAAGAA GTCGCTGCTT TCGCGGCCGC CGGGGAATCG
CAGATCACCG GCAAGCTCGC GGTTTGCGCC GGATCCTGCG GTCCGGGAAA CCTGCATCTG
ATCAATGGCC TGTATGATGC ACAGCGGACC CGGACTCCGG TGCTGGCCAT CGCGGCGCAG
ATTCCATCGG CGGAGATCGG CGGCGGCTAC TTCCAGGAAA CGCACCCGCA GAATCTGTTT
CGCGAATGCA GCGTCTATTG CGAGCTGGTG TCCGATCCGC ATCAGTTCGA CTACGTCCTC
GAAAACGCGA TCCGGGCCGC GGTCGGTCAG CGGGGTGTCG CCGTCGTCGT GATTCCTGGC
GATGTGGCGC TGCGCGAGGC TTCGACACGT GGGGTGACGC CCGTTGCCGG CCTGCTGCCG
CCGACGCCGA TCGTGACGCC GGCCGAGCCG CAGCTCGACG CGCTGGCGGC GCTGCTGAAC
GGCGCCGGGC GGGTCACGCT GTTCTGCGGC CGCGGCTGTG CAGGTGCCCA CGCGCCGTTG
ATGGCGCTGG CCGAAGCTCT GAAGAGCCCG ATCGTCCACG CGCTGGGCGG CAAGGAACAC
GTCGAATACG ACAATCCCTA CGACGTCGGG ATGACCGGCT TCATCGGCTA CGCGTCGGGC
TACGAGGCGA TGCATGCCTG CGATGTGCTG TTGATGCTCG GCACCGACTT TCCCTACAAG
CAGTTCCTGC CGACCGGCGC GCGAATCGCG CAGGTCGACA TTCGCGCCGA GAATCTCGGT
CGCCGTTGCA AGCTCGCGCT TGGCCTGGTC GGCGGTGTCC ACGAAACCAT CGAGGCCTTG
CTGCCGAAAT TGACGACCAA GACCGACCGC GGGCACCTCG ATCACAGCGT GGCACGCTAC
GTCGCATCCC GGCAGGGCCT CGACGATCTG GCGAAGGGCA CGCCCGGCCG CAAGCCGATC
CATCCGCAGT ATCTCGCCAA GCTGATCAGC GACGGCGCCG CCGACGATGC GGTGTTCAGC
TTCGACGTCG GAACACCGAC GATCTGGGCC GCCCGCTATC TGAAAATGAA CGGAAGCCGG
CGTCTGGTCG GCTCTCTGGT GCACGGTTCG ATGGCCAACG CGCTGCCGCA TGCCATCGGC
GTGCAGGCCG CCCAGCCGAG CCGGCAGGTG ATCTCGCTGT CGGGGGATGG TGGCTTCACC
ATGCTGATGG GAGACCTCAT CACGCTCACG CAGATGAAAT TGCCGGTCAA GGTCGTCATT
TTCAACAATG GCGTACTCGG CTTCGTGGCG CTCGAGATGA AGGCGGCGGG ATTTGTCGAG
TTGGGCACCG ATCTACAGAA TCCCGATTTC GCCGCCATGG CGCGTGCGAT GGGCATCCAT
GGCGTGCGGG TTGAGGATCC CGGCGATCTG CCGGCGGCGG TGGCCGACGT GCTGGCTCAT
GATGGCCCAG CCGTGCTCGA CGTCGTCACC GCGACCCAGG AGCTGTCGAT GCCGCCCACC
ATCGGCGCCG AACAGGTCAA GGGCTTCAGT CTCTGGCTGC TCCGCGCGGT GATGAGCGGC
CGCGGTGACG AAGTGATTGA TCTCGCGAAG CAGAACCTGC TGCCCCGGTA G
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| Protein sequence | MSNVADRIVE TLHQAGVERI FGVVGDSLNG LTEALRQHGS IEWVHVRHEE VAAFAAAGES
QITGKLAVCA GSCGPGNLHL INGLYDAQRT RTPVLAIAAQ IPSAEIGGGY FQETHPQNLF
RECSVYCELV SDPHQFDYVL ENAIRAAVGQ RGVAVVVIPG DVALREASTR GVTPVAGLLP
PTPIVTPAEP QLDALAALLN GAGRVTLFCG RGCAGAHAPL MALAEALKSP IVHALGGKEH
VEYDNPYDVG MTGFIGYASG YEAMHACDVL LMLGTDFPYK QFLPTGARIA QVDIRAENLG
RRCKLALGLV GGVHETIEAL LPKLTTKTDR GHLDHSVARY VASRQGLDDL AKGTPGRKPI
HPQYLAKLIS DGAADDAVFS FDVGTPTIWA ARYLKMNGSR RLVGSLVHGS MANALPHAIG
VQAAQPSRQV ISLSGDGGFT MLMGDLITLT QMKLPVKVVI FNNGVLGFVA LEMKAAGFVE
LGTDLQNPDF AAMARAMGIH GVRVEDPGDL PAAVADVLAH DGPAVLDVVT ATQELSMPPT
IGAEQVKGFS LWLLRAVMSG RGDEVIDLAK QNLLPR
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