| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0195 |
|---|
| Symbol | |
|---|
| ID | 3909436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 219879 |
|---|
| End bp | 220400 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637882076 |
|---|
| Product | Ferritin and Dps |
|---|
| Protein accession | YP_483817 |
|---|
| Protein GI | 86747321 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.647042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTC CTCTCGTCCG CCCCGAACTG GAGGGCCCGA CTGATCTATC CAGCGACGCC
ACCCGAGATA TCGCCCCGGC ACTCCGCGCC ATGCTGGCAG ACGTGTTCGC GGTGTATCTG
AAGACCAAGA ATTTCCACTG GCACATGTCC GGCCCGCACT TCCGGGACTA CCATCTGCTG
CTGGACGAGC AGTCCGATCA GATCTTCGCG ATGACCGATC AGATCGCCGA GCGCGCCCGC
AAGATTGGCG GCACCAGCCT GCGCTCGATC GGGCACATCG CCCGCACCCA GCGGATTCTC
GACAACGACG CCGACTACGT CGATCCGCAG GACATGCTGT CCGAACTGTG CAGCGACAAC
CAGCAGCTGA CCAGGGAACT GCGACGTCTG CACGACCTCT GCGACGAATA TGGTGACGTC
GCCACCGCCA GCCTGATCGA GAACTGGATC GACGAGTCCG AGCGGCGCAT CTGGTTTCTC
TACGAAGCCG TGCGACGCGG GCACAATTCG CAAGGACGTT GA
|
|---|
| Protein sequence | MSLPLVRPEL EGPTDLSSDA TRDIAPALRA MLADVFAVYL KTKNFHWHMS GPHFRDYHLL
LDEQSDQIFA MTDQIAERAR KIGGTSLRSI GHIARTQRIL DNDADYVDPQ DMLSELCSDN
QQLTRELRRL HDLCDEYGDV ATASLIENWI DESERRIWFL YEAVRRGHNS QGR
|
|---|
| |