| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0191 |
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| Symbol | |
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| ID | 3907796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 212254 |
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| End bp | 214485 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637882072 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_483813 |
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| Protein GI | 86747317 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.766687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAG CCCCGCTTCC GGACAACGAG CAGGCGCGGC TCACCGCGCT GCGCCGATAT
GATATTCTTG ATACCCCGTC GGAGGATTGT TTCGACATAT TCCCTCGGCT GGTCGTCCGG
GCGATCGGCG TCCCCTCGGC CGTGATCAGC TTTGTCGACA GCGAGCGTCA ATGGTTCAAG
GCCCGGATCA ACGTCACCGA CCAACAGACA CCGCGCGATA TAGCGTTCTG CGCGCACGCG
ATCCTTCGTG ATCGCCCGCT CGTGGTTGCG GATGCGACGA TCGATCCGCG ATTCCACGAC
AACCCGCTGG TAACCGCATC AGGCGGCGTG CGGTTCTACG CAGGTGCCCC GATACGAACC
GCGGAGGGCT TTGCCATCGG CGTGCTCTGT GCGATCGACA AGGTCCCCCG CCTCCTTGGA
AAAGCGCAAC TGGAAACGCT CCGAGAGCTG GCATCGTTGG TCGCCGACCA ACTCGATTTG
CGACTGGCGA ATCGACGTCT CGCCCGCGAA GTCGCCGAAC GCGAACGCAC CGAGAACCAT
CTGCGGTCGA TGAGCCGAAC GCTGGAGCTG TCGAACCTGC GCCTGGATGC GGCGCTCAAC
AACTTCCTCC ATGGGCTGTG CATGTTCGAT GGCGACCGCA AGGTGGTGGT GTCGAATGCA
CGCTTCGCCG GAATCTACTC TCTCAGACCC GACGAAATCC GGTGCGGCGT TTCTTTGAGC
GCGATCCAGT CGGCGTGCCG AGAACGCGGG ACGTTCGTGG AAAGCTGGTC GGAACGCAGG
CTTGGTCGAT GTTCGGACGA CATCTCCGAA GTGAGTTCGC TGCAAGACGG GCGGACGATC
CTGGTGCGCT GTCAACCGGT CGCAGGTGGC GGCTGGATGA CCGTGCACGA GGACATCACA
GAGCGCTATC GCAGCGAACA GCAAATCGCC CATATGGCCC GCCACGATCT GCTGACCGGC
CTGCTCAATC GCGGAGCCTT CCACGAAAGG ATGGATGAGG CCTGTGCACG CCTGCGCCGC
TGGGGTGAGA CCTTCTCGGT CATCATGCTG GACCTGGACC GCTTCAAGCT CGTCAACGAT
TCGCTCGGAC ATCCGGCGGG GGATGCCCTG CTACGCGCGG TGGTCTCGCG GCTGAAGGCG
TGCATTCGCG AAACGGATGT TCTGGCGCGG CTCGGTGGGG ACGAATTCGC CGTGCTGCAG
ACAAGGACGA AAGACTCGTA CAACGAGGCG GTGGCCTTCG CGGACCGGAT CGTCAATTGC
CTGATCGATC CGATCGAGAT CGACGGGCAT CAGCTCGTCA TCAGCACCAG CGCGGGAATC
GCGCTGGCCC CCCAACACGG CACGGATTCC GACGAGTTGA TCAAAAATGC CGACCTCGCG
CTCTATCGAG CCAAGGCGGC TGGCCGCAAC GGATACGTCA CCTTCGAAAC CGCGATGAAG
GACCGTGCCA ATGCGCGCCA GCAACTGGAA GGAGAATTGC GACAAGCCAT TCTGAATCGA
GAGTTCGATT TGTACTATCA GCCACAGGTC GAAGCCAGGT CCGGGAGAGT GATCGGCGCG
GAGGCGCTGC TACGCTGGCG CCACCCGAGG CGAGGCTTCG TGCCGCCGTC CGAGTTCATT
CCGGTCGCGG AGGAAACCGG CCTGATCGAA AAGCTCGGCG AATGGGTCCT AAAGGAGGCT
GCCGCCGAGG CCATTCGCTG GCCGGCCCCC ATCAAGCTCG CGATCAATCT CTCTCCGGTC
CAGTTGAGTC GCGGCAACTT GACCGACACT GTGACGCAAG CTCTGCGACT TTCGGGGCTG
CCTCCAGAGC GCTTGGAGGT GGAGATCACG GAAAACGTGT TTCTAGAGGA CGAAGTCAAC
AACCTCGCCG TCATTAGACA GCTGCGGTCC CTCGGGGTAT CCGTGGCCCT GGACGACTTT
GGGACAGGAT ATTCGTCGCT CAGCTATTTA ACGAGATTTC CGTTCGATCA AATCAAAATC
GACAAATTTT TCAGCATGAA TCTGATCGAG CGAAGCGACT GCGCCACAAT CGTCTCCTCG
GTGATAACTC TGGCGCGAGG CTTGGGGATC TCCACCGTCG CCGAAGGCGT CGAAACAGTG
CGTCAGTTCG AACTGCTGCG GGAGGCGGGC GTCGACTACT TCCAGGGATA TCTGTTCGGT
CACCCAGTTC CGGCTTCGGC GCTCAATTTC GGTGCCGCTC ACGACATCAC GCGCATCACG
GAGGTCGCCT GA
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| Protein sequence | MISAPLPDNE QARLTALRRY DILDTPSEDC FDIFPRLVVR AIGVPSAVIS FVDSERQWFK
ARINVTDQQT PRDIAFCAHA ILRDRPLVVA DATIDPRFHD NPLVTASGGV RFYAGAPIRT
AEGFAIGVLC AIDKVPRLLG KAQLETLREL ASLVADQLDL RLANRRLARE VAERERTENH
LRSMSRTLEL SNLRLDAALN NFLHGLCMFD GDRKVVVSNA RFAGIYSLRP DEIRCGVSLS
AIQSACRERG TFVESWSERR LGRCSDDISE VSSLQDGRTI LVRCQPVAGG GWMTVHEDIT
ERYRSEQQIA HMARHDLLTG LLNRGAFHER MDEACARLRR WGETFSVIML DLDRFKLVND
SLGHPAGDAL LRAVVSRLKA CIRETDVLAR LGGDEFAVLQ TRTKDSYNEA VAFADRIVNC
LIDPIEIDGH QLVISTSAGI ALAPQHGTDS DELIKNADLA LYRAKAAGRN GYVTFETAMK
DRANARQQLE GELRQAILNR EFDLYYQPQV EARSGRVIGA EALLRWRHPR RGFVPPSEFI
PVAEETGLIE KLGEWVLKEA AAEAIRWPAP IKLAINLSPV QLSRGNLTDT VTQALRLSGL
PPERLEVEIT ENVFLEDEVN NLAVIRQLRS LGVSVALDDF GTGYSSLSYL TRFPFDQIKI
DKFFSMNLIE RSDCATIVSS VITLARGLGI STVAEGVETV RQFELLREAG VDYFQGYLFG
HPVPASALNF GAAHDITRIT EVA
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