| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0189 |
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| Symbol | |
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| ID | 3907794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 208007 |
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| End bp | 209626 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882070 |
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| Product | hypothetical protein |
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| Protein accession | YP_483811 |
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| Protein GI | 86747315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG TCGAACGCGA TCCCCCGATG ACGGCCGAAA CACGGGCGTC CCCCTGGATC
GCGTTCCGCC ACACCGCCTT TACGGTGGTC TGGACCGCAA CCGTCGTCGC CAACGTCGGC
ACCTGGATGT ACAACGCGGC ATCCGGCTGG CTGATGACGA GCCTGGAAGC CGATCCACTG
ACCGTTTCGC TCGTTCAAGT CGCGTCCAGC CTTCCGATGT TCCTGTTCGC GATCCCGGCC
GGCGCGCTGG CGGACATCGT CGACAAGCGG CGCTTCCTGA TCCTGATCGA GATCGTGCTC
ACCGTGTTTG CGGCCGCGAG CGCGGTGCTG GTCTGGCTCG GGCTGATGAA CCCGTTCCAG
CTGTTGCTGT TCACGTTTCT GCTCGGCGCG GGTGCGGCGT TCGCGGCGCC GGCCTGGCAA
TCGATCGTGC CGGATCTCGT GCCCAAGGAG CACCTCGCAT CGGCGGTGGC GAGCAATGGC
GTCGGCATCA ATGTCAGCCG GGCGATCGGC CCGGCGCTGG GCGGCGTGGT GATCGGCGTC
GCGGGCATCG CGGCGCCGTT CTGGATCAAC GCGCTGAGCA ATTTCGCGGT GATCGGCGCG
CTGCTGTGGT GGCGCCCCGC CGCCAAGCGC GCGGCGACGC TGCCTCCGGA ACGGTTGTTC
AGCGCGATCG TGATCGGCTT TCGCCACGCG CGATACAATC TCGATCTGCG CGCCACACTG
GTGCGCGCGG TCGCGTTCTT CTTTTTCGCC AGCGCGTATT GGGCGCTGCT GCCGCTTGTC
GCCCGCTCGC GCATCGCCGG GGGACCGGAA CTGTACGGCA TTTTGCTCGG CGCAATCGGC
CTCGGCGCGA TTGTCGGCGC GTTCCTGTTG CAGGGGTTGA AATCGGCGCT GGGGCCGGAT
CGCTTGGTCG CGGCCGGCAC GCTCGGGACA GCGGTCAGCC TCGTTCTGCT CGGCAGCGTC
CAACGCGTCG AACTCGCGAC CGCGGCCTGT TTCATCGCGG GCGTTTCGTG GATCGCGGTT
CTCGCCAACC TCAACGTTTC CGTTCAGGTC GCGCTACCGG ACTGGGTGCG CGGCCGCGGC
CTGGCGATGT TCGTCACGGT GTTCTTCGGC GCGATGACGG CCGGCAGCGC GCTCTGGGGT
CAGTTGGCGT CGTCGTTCGG ATTGCCGGCA GCGCATTTCG CCGCGGCCGT CGGCGCCGTC
GTCGGCATCG CCGTGACGTG GCGCTGGAAA CTGCGCGGCA GCGCCGAGCA CGATCTCGCA
CCCTCGATGC ATTGGCCCGC GCCGGTGCTG GCCATCGATG CCGATGCCGA TCAAGGCCCG
GTGCTGATTA CGGTCGAGTA CCATGTCGCA GCGGACAGGC GCGACGCCTT CCTGCTGGCT
ATGCGAAAAT TGAGCCGACA GCGACGGCGT GACGGCGCAT ATGCGTGGGA CGTGTTCGAA
GATACCTCGG AGCGCGGACG ATTCGTCGAG GTGTTCAAAG TTGCGTCATG GCTCGAGCAT
CTTCGGCAAC ATGATCGCGT CACCAATGCG GATCGGATCG ATCAGAATGC GATCCGCCAT
TTCCACGCGA GCGCAGAGCC TCGCGTGACG CACTTGCTCG CTGCGAAGTT CCCGGCATGA
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| Protein sequence | MTNVERDPPM TAETRASPWI AFRHTAFTVV WTATVVANVG TWMYNAASGW LMTSLEADPL
TVSLVQVASS LPMFLFAIPA GALADIVDKR RFLILIEIVL TVFAAASAVL VWLGLMNPFQ
LLLFTFLLGA GAAFAAPAWQ SIVPDLVPKE HLASAVASNG VGINVSRAIG PALGGVVIGV
AGIAAPFWIN ALSNFAVIGA LLWWRPAAKR AATLPPERLF SAIVIGFRHA RYNLDLRATL
VRAVAFFFFA SAYWALLPLV ARSRIAGGPE LYGILLGAIG LGAIVGAFLL QGLKSALGPD
RLVAAGTLGT AVSLVLLGSV QRVELATAAC FIAGVSWIAV LANLNVSVQV ALPDWVRGRG
LAMFVTVFFG AMTAGSALWG QLASSFGLPA AHFAAAVGAV VGIAVTWRWK LRGSAEHDLA
PSMHWPAPVL AIDADADQGP VLITVEYHVA ADRRDAFLLA MRKLSRQRRR DGAYAWDVFE
DTSERGRFVE VFKVASWLEH LRQHDRVTNA DRIDQNAIRH FHASAEPRVT HLLAAKFPA
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