Gene RPB_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0185 
Symbol 
ID3907790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp203926 
End bp204768 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID637882066 
ProductAlpha/beta hydrolase 
Protein accessionYP_483807 
Protein GI86747311 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG GATACGTCAA GACAAAGGAC GGCGTCGATA TCTACTACAA GGATTGGGGC 
CCCAAGCAGG CTCAGCCGAT CGTGTTCCAT CACGGCTGGC CGCTGTCGTC CGACGATTGG
GACGCGCAGA TGCTGTTCTT CGTCGCGCAA GGCTACCGCG TCGTCGCGCA TGATCGCCGC
GGTCACGGCC GCTCGTCGCA GGTCGAACTC GGCCACGATA TGGATCACTA CGCCGCCGAC
GCCTTCGCCG TCGCCGAGCA TCTCGACCTC AAGAACGCCG TGCATATCGG CCATTCGACC
GGCGGCGGCG AAGTCGCGCG CTATGTCGCC AAGTTCGGCG AGCCGCACGG CCGCGTCGCC
AAGGCGGTGC TGGTCAGCGC CGTGCCGCCG CTGATGCTCA AGACCGAGAC CAACCCCGGC
GGCCTGCCGA TCGAAGTGTT CGACGGCTTC CGCAAGGCGC TCGCCGACAA TCGCGCCCAG
TTCTTCCTCG ACGTTCCCGC CGGCCCGTTC TACGGATTCA ACCGCCCGGA CGCGAAGACG
CTGACGGGCG TCGTCAACAA TTGGTGGCGC CAGGGCATGA TGGGCAGCGC GCTGGCGCAT
TACGACGGCA TCAAGGCGTT CTCCGAGACC GACCAGACCG ACGACCTCAA GGCGATCACC
GTACCGACCC TCGTCCTGCA TGGCGAAGAC GACCAGATCG TGCCGATCGA CGATTCGGCG
AAGCTCTCGG TCAAGCTGCT GAAGAACGGC AAGCTGAAGA CCTATCCGGG CTTTCCGCAC
GGCATGCTCA CCACCCATGC CGACGTTCTG AACGCGGATC TGCTCGCTTT CGTGAAGGAA
TAA
 
Protein sequence
MSSGYVKTKD GVDIYYKDWG PKQAQPIVFH HGWPLSSDDW DAQMLFFVAQ GYRVVAHDRR 
GHGRSSQVEL GHDMDHYAAD AFAVAEHLDL KNAVHIGHST GGGEVARYVA KFGEPHGRVA
KAVLVSAVPP LMLKTETNPG GLPIEVFDGF RKALADNRAQ FFLDVPAGPF YGFNRPDAKT
LTGVVNNWWR QGMMGSALAH YDGIKAFSET DQTDDLKAIT VPTLVLHGED DQIVPIDDSA
KLSVKLLKNG KLKTYPGFPH GMLTTHADVL NADLLAFVKE