| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0171 |
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| Symbol | |
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| ID | 3907776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 185450 |
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| End bp | 186520 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882053 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_483794 |
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| Protein GI | 86747298 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTA GCTGGATGCG TTGGGTCGTG ATCGTCGCCG TGGTGGCGGT TGCGGGTGGA
GGTTACTTCG CGTGGCGAAC GTTCGGCGCC AAGGGGTTGC CGCCCGGCAT CGCCAGCGGC
AACGGCCGGA TCGAGGCGAC CGAGATCGAC GTTTCCACGA AGTCGGCCGG CCGCATCCGC
GACATTCTCG TGCGCGAGGG CGATTTCGTC ACCGCGGGTC AGGTGCTGGC GCGGATGGAT
ACGGATCAGC TCGAGGCGCA GCGCCGCCAG GCGGAGGCGC AGTTGCGGCG GGCCAGCATC
GGCATCGAGA CCGCGACCAG CCTGGTCACG CAGCGCGAAG CCGAGCGTGA GGCGGCTGTC
GCGGTGATCG CGCAGCGCGA CGCCCAGCTC GACGCGCTGG AGCGCAAGCT GGCGCGCGCC
GAAGCGCTGA TCAAGACCAG CGCGGTGTCG CAGCAGGTGC TGGACGACGA CCGCGCCAAC
GAGCAGGGCG CGAAGGCCGC GGTCGCCGCC GCCAAGGCGC AGCTCGCGGC CAGCGAGGCG
GCGATCAGCT CGGCGAAAGC GCAAGTGATC GACGCCGGCG CGGCGGTCGA CGCCGCCAAG
GCCGCGATCG ACAGCATCAC TGTCGAGATC AACGACAGCA CGTTGAAATC GCCGCGCGAC
GGCCGCGTGC AATATCGCGT CGCCCAGCCC GGCGAAGTGA TCGCCGCCGG CGGGCGCGTG
CTGAATCTGG TCGATCTCAG CGACGTCTAC ATGACCTTCT TCCTGCCGAC CGCGCAGGCC
GGGCAGATCG CGATCGGCGC CGATGTGCGT CTGGTGCTCG ACGCGCTGCC GCAGGTGGTG
ATTCCGGCGA AGGCGACCTT CGTCGCCGAC ACCGCGCAGT TCACGCCGAA GACGGTGGAG
ACCGAAGAGG AACGGCAGAA GCTGATGTTC CGGGTCAAGG CGCACATCCC CCAGGAGCTG
CTGCGCAAGT ACATCCAGCG CGTCAAGACC GGACTGCCGG GCGTGGCCTA TATTCGGCTC
GATCCGAAGG CCGAATGGCC GGCCAATCTC AGCGGCACGC TGGCGCAATG A
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| Protein sequence | MASSWMRWVV IVAVVAVAGG GYFAWRTFGA KGLPPGIASG NGRIEATEID VSTKSAGRIR
DILVREGDFV TAGQVLARMD TDQLEAQRRQ AEAQLRRASI GIETATSLVT QREAEREAAV
AVIAQRDAQL DALERKLARA EALIKTSAVS QQVLDDDRAN EQGAKAAVAA AKAQLAASEA
AISSAKAQVI DAGAAVDAAK AAIDSITVEI NDSTLKSPRD GRVQYRVAQP GEVIAAGGRV
LNLVDLSDVY MTFFLPTAQA GQIAIGADVR LVLDALPQVV IPAKATFVAD TAQFTPKTVE
TEEERQKLMF RVKAHIPQEL LRKYIQRVKT GLPGVAYIRL DPKAEWPANL SGTLAQ
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