| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0170 |
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| Symbol | |
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| ID | 3907775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 182676 |
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| End bp | 185453 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882052 |
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| Product | ABC-2 type transport system |
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| Protein accession | YP_483793 |
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| Protein GI | 86747297 |
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| COG category | [R] General function prediction only
[V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component
[COG4152] ABC-type uncharacterized transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.476544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC CCGCGGTCGG GACGGACGCG CGCGCGCCGG TGGTCCGGCT CGCCGCGGTG
TCGCTGCGCT ACGGCAAGAC GCTGGCGCTC GACGACGTCA CGCTCGATTT GCCGTCGGGC
TGCATGATCG GCCTGATCGG TCCCGATGGC GTCGGCAAAT CGAGCCTGCT GTCGCTGGTC
TCGGGGGCGC GCGCGGTGCA GCAGGGTCGC GTCGAGGTGT TCGGCGGCGA CATCGCCGAT
GCCGCACATC GCCGCGATAC GTGTCCGCGG ATCGCCTATA TGCCGCAGGG GCTCGGCAAG
AATCTGTATC CGACGCTGTC GGTGTTCGAG AATGTCGACT TCTTCGGCCG GCTGTTCGGC
CAAGGCCGTC GCGAGCGCGC CGCGCGGATC GCCGAACTAC TTGAAAGTAC CGGGCTTTCG
CCGTTCGCCG AGCGGCCTGC CGGAAAGCTG TCCGGCGGTA TGAAGCAGAA GCTCGGGCTG
TGCTGCGCGC TGATCCACGA TCCGGATCTG CTGATCCTAG ACGAGCCGAC CACCGGCGTC
GATCCGCTGT CGCGCGGGCA GTTCTGGGAA TTGATCAACG ACATCAGGGC GCAACGCCCC
GGTATGAGCG TGATCGTGGC GACCGCCTAC ATGGAGGAGG CGGAGCGCTT CGACCATCTG
GTGGCGATGA ATGCCGGGCA GGTGCTGGCG ACCGGAACGC CTGCGGATCT GTTGCGGCAA
ACTGGTGGCA AATCGTTGGA TGCCGCCTTC ATCGCGCTGT TGCCCGAAGA CGAGCGCCGC
GGCCATGCCG AGGTGGTGAT TCCGCCGCGC ACGACCGGCA CGACCGGCAT CGCGATCGAG
GCTGAACATC TCACCATGCG GTTCGGCGAC TTCACCGCGG TCGACGACGT CTCGTTCCGG
ATCGAGCAGG GCGAGATCTT CGGCTTCCTC GGCTCCAACG GCTGCGGCAA GACCACGACG
ATGAAGATGC TGACCGGTCT GCTCGCGGCC AGCGAGGGCA CCGCGAAGCT GTTCGGCAAC
GAGGTCGATC CGAACGACAT GGCGGTGCGC CGGCGCGTCG GTTACATGTC GCAGGCGTTC
TCGCTCTACA CCGAACTCAC CGTGCGGCAG AATCTCGAAC TGCACGCGCG GCTGTTCCAG
ATGGAGCCCG CCAAGATCGC GCCGCGGATC GCCGAGATGG AGCGCCGCTT CGATCTCGCC
GAGGTGATCG ACAAGCTGCC GGATGAGTTG CCGCTCGGCA TCCGTCAGCG GCTGTCGCTG
GCGGTGGCGA TGATCCACTC GCCCGACATT CTGATCCTCG ACGAGCCGAC CTCCGGCGTC
GATCCGATCG CGCGCGACGG CTTCTGGCAG ATGTTGTCCG ACCTGTCGCG CAACGACAAC
GTCACCATCT TCGTTTCCAC CCACTTCATG AACGAGGCGG AGCGCTGCGA CCGCATTTCG
CTGATGCATG CCGGCCGCGT GCTGATCAGC GACACGCCGG GCGCGATCGT CGCGAGCCGA
TCGGCGGCGA GCCTGGAGGA CGCCTTCATC GCCTATCTGG AGGAGGCGAT CGGAACCGCG
GCGACGCCAT CGGCGCCGCA GACCACTGCC GCGCAAGTCA CATCCGCAGC AGATGAGGAC
GCCCCGCATC CGCCCCGGGC ATCGTCGTCC TGGTTCGATC TGCGGCGGAT GCTGGCTTAT
ACGCGGCGCG AGGCGCTCGA ACTGCAGCGC GATCCGATCC GCGCCACGCT GGCGCTGATC
GGCAGCGTGG TGCTGATGTT CGTGCTCGGT TACGGCATCA ATCTCGACGT CGAAAAACTG
ACCTTCGCCG CGCTCGATCG CGACGACACT GCGATCAGCC GCGACTACAT CCTCGACATC
GCGGGCTCGC GCTATTTCGC CGAGCAGCGC CCGATCACCG ATTACGCCGA TCTCGACCGC
AGGATGCGCA GCGGCGAGCT GACGATGGCG ATCGAGATCC CGCCGGGATT CGGCCGCGAC
GTCTCGCGCG GCCGTTCGGT CGAGGTCGGC GCCTGGATCG ACGGCGCGAT GCCGTCGCGG
GCGGAAACCG CGCGCGGCTA CGCGCAGGCG ATGCATCTCG GCTGGCTCAA GCGGAAGGCA
AGCGAGCTCT ACGGCGATGC CGCGACCGCC GGCAGCTTCC AGATCGCGAT GCGCTATCGC
TACAATCCGG ACATCCGGAG CGTGGTGGCG ATGGCGCCCG CGGTGATTCC GCTGCTGTTG
CTGATGATTC CGGCGATGCT CGCAGCGCTC AGCGTGGTGC GCGAGAAGGA GCTCGGCTCG
ATCATCAATT TCTACGCGAC GCCGACCACG CGGCTGGAAT TCCTGATCGG CAAGCAACTG
CCCTATGTGG TGCTGGCGAT GCTGAATTTC GTGATGCTGA CGGCGTTCGC GATTGTGGTG
TTCCGGGTGC CGTTCACCGG CAGCTTCTTG GCCTTCGGCA CGGGCGCGCT GCTCTACGTC
GTGTTCGCCA CCGCGCTCGG CCTGCTGCTG TCCACCTTCA TGAACAGCCA GATCGCGGCG
ATCTTCGGCA CCACGCTGCT GACGCTGATC CCGGCGATCC AGTTCTCCGG CCTGATCGAT
CCGGTTTCGT CGCTGCAGGG CGCCGGTGCG TTCATCGGCA AGATCTATCC GACCACCTAT
TTCGTCGACA TCACGCGCGG CGCGTTCTCG AAGGGGCTGG GCTTCGAACA GATGTGGGGG
TCCTTCGTCC CGCTGCTGAT CGCGGTGCCG CTGCTGTTCG GCCTCGGCGC CGCGCTGCTC
CAGAAACAGG CCAAGTGA
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| Protein sequence | MSDPAVGTDA RAPVVRLAAV SLRYGKTLAL DDVTLDLPSG CMIGLIGPDG VGKSSLLSLV
SGARAVQQGR VEVFGGDIAD AAHRRDTCPR IAYMPQGLGK NLYPTLSVFE NVDFFGRLFG
QGRRERAARI AELLESTGLS PFAERPAGKL SGGMKQKLGL CCALIHDPDL LILDEPTTGV
DPLSRGQFWE LINDIRAQRP GMSVIVATAY MEEAERFDHL VAMNAGQVLA TGTPADLLRQ
TGGKSLDAAF IALLPEDERR GHAEVVIPPR TTGTTGIAIE AEHLTMRFGD FTAVDDVSFR
IEQGEIFGFL GSNGCGKTTT MKMLTGLLAA SEGTAKLFGN EVDPNDMAVR RRVGYMSQAF
SLYTELTVRQ NLELHARLFQ MEPAKIAPRI AEMERRFDLA EVIDKLPDEL PLGIRQRLSL
AVAMIHSPDI LILDEPTSGV DPIARDGFWQ MLSDLSRNDN VTIFVSTHFM NEAERCDRIS
LMHAGRVLIS DTPGAIVASR SAASLEDAFI AYLEEAIGTA ATPSAPQTTA AQVTSAADED
APHPPRASSS WFDLRRMLAY TRREALELQR DPIRATLALI GSVVLMFVLG YGINLDVEKL
TFAALDRDDT AISRDYILDI AGSRYFAEQR PITDYADLDR RMRSGELTMA IEIPPGFGRD
VSRGRSVEVG AWIDGAMPSR AETARGYAQA MHLGWLKRKA SELYGDAATA GSFQIAMRYR
YNPDIRSVVA MAPAVIPLLL LMIPAMLAAL SVVREKELGS IINFYATPTT RLEFLIGKQL
PYVVLAMLNF VMLTAFAIVV FRVPFTGSFL AFGTGALLYV VFATALGLLL STFMNSQIAA
IFGTTLLTLI PAIQFSGLID PVSSLQGAGA FIGKIYPTTY FVDITRGAFS KGLGFEQMWG
SFVPLLIAVP LLFGLGAALL QKQAK
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