Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0166 |
Symbol | |
ID | 3907771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 178686 |
End bp | 179657 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882048 |
Product | periplasmic binding protein |
Protein accession | YP_483789 |
Protein GI | 86747293 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCG CAATCCTTTC AAAGCCCGCG CGCTACGCGA TCGTCTCGCT GCTGGCGTCG ACCGTCGTCA CAGCGAGCCC CGGCCTCGCC GGCGACATCG CGGTGCGCGA CGCGCTCGGC CGTGAGGTCG TGATCGCCGA CACCTCGCGC ACGCTGTCGA TCGGTGGCGC CATCACCGAA GTTCTCGTCG CCCTCGGACT CGAACAGCGC ATCACCGGGA TCGATTCGAC CAGCACCTAT CCGCCGACGG CGGTGAAGGA CAAACCGAAT GTCGGCTATC TGCGGCAACT GTCCGCCGAA GGCGTGATCG GGCTGAACCC GACGCTGATT CTGGCGATGG ACAGCGCCGG CCCGAAGCAG ACCATGCAGG CGATCGAATC GGCGAAGATT CCGCTGGTGC TGATTCCGGA GAAACTCACC GAGCAGGGAC TGCTCGACAA GATCCGGCTG ATCGGCCATG CCATGAACGC CGATGCGTCC GCGAACTGTC TCGCGACCGC GGTCGCCGAG GATTTCGATC AGCTCCGCCA GCTCAGGGCG AAGATCGACC GGCCGCTGCG GGTGATGTTC GTGATGTCGC TGGTCAATGG CCAGGCGATG GCGGCCGGCC GCAACACCGC GGCCAACGAG ATCATCGAAC TGTCCGGCGG CGTCAATGCC ATCGACGGCT ATGACGGCTA CAAGTCGATC AACGACGAGG CAATCGTCGC GGCGAAGCCC GACGCGGTGC TGACGATCAG GCGCAGCCGC GACACCTTCG AGGCCGACGC GTTCTACGCC CATCCCGGCT TCGCGCTGAC GCCGGCCGCG AAGAACCGCG TCTTCGTGGC GATGGACGGG CTGTATCTGC TCGGCTTCGG CCCGCGCACT CCGGCCGCCG CGCGCGACGT CGCCGCGACG CTGTATCCGC AGCTCGCGAG CCAGGCCGGC GACTTCAAGC CGAAGGCGGC GTCGGCCGTT TGCCGCCCAT GA
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Protein sequence | MIAAILSKPA RYAIVSLLAS TVVTASPGLA GDIAVRDALG REVVIADTSR TLSIGGAITE VLVALGLEQR ITGIDSTSTY PPTAVKDKPN VGYLRQLSAE GVIGLNPTLI LAMDSAGPKQ TMQAIESAKI PLVLIPEKLT EQGLLDKIRL IGHAMNADAS ANCLATAVAE DFDQLRQLRA KIDRPLRVMF VMSLVNGQAM AAGRNTAANE IIELSGGVNA IDGYDGYKSI NDEAIVAAKP DAVLTIRRSR DTFEADAFYA HPGFALTPAA KNRVFVAMDG LYLLGFGPRT PAAARDVAAT LYPQLASQAG DFKPKAASAV CRP
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