| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0162 |
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| Symbol | |
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| ID | 3907767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 173463 |
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| End bp | 175799 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882044 |
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| Product | TonB-dependent iron siderophore receptor |
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| Protein accession | YP_483785 |
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| Protein GI | 86747289 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGGC TGAACTCGCG CATCCGTGCG CTGTTGCTAT CTGGATCCGT CGTCGCACTG
GCGGTGGCGC CCGCTGCGGC GCAAACCGCG ACGACCTCGT CGCCACCGAA CCAGCAGAAG
CAAGCCAAAC GGCAGCAGGC GGCGAAGCCA GCGGCGCAAC AGCAGGTGCA AACGCCTGCG
CGCGATCCGC GCGACGCGCT GGCGCAGGCC GGGCAAGGCG TCCAGGCGCT CGACACCATC
ACCGTGTCGG CGACGAAGAC TGAGGAGCGC GCGATCGACG CGCTGGCGCC GGCGAGCGCG
ATCACCCAGG GGCAGATCGA GCGGCTGCAG CCGAACCGGC TGCAGGACAT TTTCGTCGCC
ACCCCGGGCG TGGCGTTCCA GGACCGCGGC GACGATCCGT CCACCGCCAT CAACATCCGC
GGCCTGCAGG ATTTCGGCCG GGTCGCCGTG GTGGTCGACG GCGCGCGGCA GAACTACCAG
CGCTCCGGCC ACAATGCGCA GGGCTCGTTC TTTCTCGATC CCGAATTGAT CGGCGGCGTC
GACGTGGTGC GCGGCCCCAG CGCCAACGTC TACGGTTCGG GCGCGATCGG CGGCGTGGTG
TCGTTCCGCA CCAAGGACAT CGACGACGTG CTGCGTGCCG GCGAGCGCTG GGGCGTCGAC
ATGACGGGGT CCTACGGCAG CAACAATGCG CGCGGGCTCG GCTCGATATT CGGCGGCGTC
CGGGTCGATC CCACCGTCGA CGTGTTCGGC GGTGCGCTGT ATCGCACGCA AGGCAACTAC
AAGGACGGCG CCGGCACCGA GATCGGCAAC ACCGGCAACG ACATCGCCGG CGGGCTGCTG
AAGCTGACGG TGCGGCCGGC CGACGGCCAC GAGATCAAGT TCGGCGGCAT CTTCCAGGAC
TACAATTACG ATATCGGCCA GTTCAATCGC GGCCCGGTGC TGACCGCGGC GCAGCGCGCG
CTGTATCAGG GTTCGTCGGT CTACGAATCC AACGTGAAGA ACTACACCGG AACGATGAGC
TGGAAGTATT CGCGGCCGGA CGACATGCTG TTCGACTGGA ACATCAGCCT GTACGGCAAC
CGCACCGACA ACGATCAGAC CAAGACCTAT CACAACTCCA CCAGCGGCGC GGCCTATTGC
GGCACCGGCA ATGTCGGCAA CAACATCTCG GGTTGCGTCG GCGACCAGCG CGGCTACCGG
CTGGATACGA TCGGCATCGA CGCCAACAAC ACCACGCGGT TCGATTACGG CGACTGGCGC
ACCGCCGTCA CCTACGGCTT CGATGTCTTC AACGACAAGG TCACGACCTG GGATTCGCGC
GGCAATTCCA ACATCACCAC CCCGAGCGGC GAGCGCACCG TGTCCGGCGG CTTCATCCAG
CTCAAGAACA ACTACGCGAG CTGGCTCGAG GTGATCGGCG CGGCGCGGTA CGACCATTAC
GAGCTCAGTT CGGAGACCAG CTCGGCGAGC GGCAGCCGGC TGTCGCCTAA GATCACCGTC
GGCGTCACAC CGCTGGCGGG GCTGACGCCC TATGTCAGCT ACGCCGAAGG CTATCGCGCG
CCGTCGATCA CCGAGACGCT GATCTCGGGC GCGCACGCCA CCGGCGGCGG CCCCGCGCTG
TTCACCTGCG CGGACGGCAC CAGCGGCCTG TTCTGTCTGA TCCCGAACAC CGGGCTGCGG
CCCGAAGTCG GCAAGAACAA GGAAGTCGGC ATCAATCTGA AATACAACGA CGTGTTCGTG
TCGGGCGACA GCTTCCGCGG CAAGATCAAC GCCTTCCGCA ACGACGTCGA CGACTATATC
GAGCTCGTCG CCTCGACGCC GCAGGCGACG ATCTACGGCA TGTACAGCAA GTATTATCAG
TATCAGAACA TCCCGCACGC CCGCATCGAA GGCGTCGAGC TCGAGACCTC CTACGACGCC
GGGCTGTGGT TCGTCGGCCT GTCGGCCTCG ACGCTGCGCG GCGTCAACAC CGACACCGGC
CTCGGCCTCG CCTCGGTGCC GTCGCGCAAG GTCGTCACGT CGGGCGGCGT GCGCCTGCTC
GACCGCAAGC TGACGATCGC TGCGCAATGG GCGTCGTACG CCGCCAACAC CAATCTGCCC
GCCGGCTATC TGCCGGCGAC CTCCTACGAT CTGGTCAATC TCAACGTCGC CTATCGGCCG
ACGGCGGACG TGACCTTGCA CTTCTCGGTC GATAATATCC TCAACAACTA CTATCGTCCG
TATGCGATCC CCGGATCGTC GACCGATGGC ACGTCGCAGA ACGATGTTCT GTTCAGCAGT
CCGGGAGCCG GCATCGTGTA CAAGGGCGGG ATCAAGGTGC ACTTCGGAGG TGCATAG
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| Protein sequence | MVGLNSRIRA LLLSGSVVAL AVAPAAAQTA TTSSPPNQQK QAKRQQAAKP AAQQQVQTPA
RDPRDALAQA GQGVQALDTI TVSATKTEER AIDALAPASA ITQGQIERLQ PNRLQDIFVA
TPGVAFQDRG DDPSTAINIR GLQDFGRVAV VVDGARQNYQ RSGHNAQGSF FLDPELIGGV
DVVRGPSANV YGSGAIGGVV SFRTKDIDDV LRAGERWGVD MTGSYGSNNA RGLGSIFGGV
RVDPTVDVFG GALYRTQGNY KDGAGTEIGN TGNDIAGGLL KLTVRPADGH EIKFGGIFQD
YNYDIGQFNR GPVLTAAQRA LYQGSSVYES NVKNYTGTMS WKYSRPDDML FDWNISLYGN
RTDNDQTKTY HNSTSGAAYC GTGNVGNNIS GCVGDQRGYR LDTIGIDANN TTRFDYGDWR
TAVTYGFDVF NDKVTTWDSR GNSNITTPSG ERTVSGGFIQ LKNNYASWLE VIGAARYDHY
ELSSETSSAS GSRLSPKITV GVTPLAGLTP YVSYAEGYRA PSITETLISG AHATGGGPAL
FTCADGTSGL FCLIPNTGLR PEVGKNKEVG INLKYNDVFV SGDSFRGKIN AFRNDVDDYI
ELVASTPQAT IYGMYSKYYQ YQNIPHARIE GVELETSYDA GLWFVGLSAS TLRGVNTDTG
LGLASVPSRK VVTSGGVRLL DRKLTIAAQW ASYAANTNLP AGYLPATSYD LVNLNVAYRP
TADVTLHFSV DNILNNYYRP YAIPGSSTDG TSQNDVLFSS PGAGIVYKGG IKVHFGGA
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