| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0160 |
|---|
| Symbol | |
|---|
| ID | 3907765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 172510 |
|---|
| End bp | 173037 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637882042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483783 |
|---|
| Protein GI | 86747287 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3721] Putative heme iron utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCGT CCGTCGTGAC GTCGGAGCCC GCCGATCTTC GGGCCTATAT GGCCGACAAT
CCGGCCGCCG TGATCGAGGA CGTGGCGCGG CAATGGAAGG TGTCGCCGCG CGACGTGATC
GAGGCGCTGC CGCCCGGCAT GGCGCGGCTC GGTCCGGGCG ACGGCTTCGT CCCGGCGATG
GCCGACATCG CCGGCTGGGG CGAGGTGACG CTGATCGTGC ACACTGAGGA TGCGATCTTC
GAATTCACCG GCGAGGTGCC GGCCGGTGAA ATCGGCCGCG GCTACTTCAA CCTGATGCAG
CCGAAAGGGC TGCACGGCCA TTTGAAACAC GACAATTGCG GCGGCGTCGC TTTCGTCGAG
CGGCCGTTCA TGGGCAAGTC CAGCGCCTTC GTGGCATTTC TCAACCAGGG CGGCGGCATC
ATGTTCAAGG TGTTCGTCGG CCGCGATTCC AGCCGCGAAT TGCGCGCCGA CCAGTTGGTG
CGGTTCAGGG CGCTTGCCGA CCGCTGCGGC GCCGGGCAGG GCGGCTAG
|
|---|
| Protein sequence | MVASVVTSEP ADLRAYMADN PAAVIEDVAR QWKVSPRDVI EALPPGMARL GPGDGFVPAM
ADIAGWGEVT LIVHTEDAIF EFTGEVPAGE IGRGYFNLMQ PKGLHGHLKH DNCGGVAFVE
RPFMGKSSAF VAFLNQGGGI MFKVFVGRDS SRELRADQLV RFRALADRCG AGQGG
|
|---|
| |