Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0144 |
Symbol | |
ID | 3908115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 157311 |
End bp | 158060 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882026 |
Product | ABC transporter related |
Protein accession | YP_483767 |
Protein GI | 86747271 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGC TGCTGCAACT CACCGGCGTC TCCCGGCACT TCTCCGGCCT GCAGGCGCTG CGCGACGTCT CGCTGTCGGT GTCGGGCGGC GAGGTGCTCG GCCTTATCGG GCCGAACGGC GCCGGCAAGA CCACGCTGGT CAACACCATC TGCGGCGTCA CCCCGGCGAA TTCCGGCACC GTCAGCTTCG ACGGCAGGGA CATCACGAAG ATCAAGACCT ATCAGGCCGC CCGGCTCGGG CTGGCACGCA CCTTCCAGAT CGTGCAGCCC TTCGCCGAAT TCTCCGCGCT CGACAACGTC GCCGCCGCGG CGCTGTTCTC GCAGCCGGGC GCCAGCCTGA GATCGGCCCG CGAGGCGGCG CGCGAGCATC TGGCTTTCGT CGGGCTGGAA CCACAGGCCG ATCAATCCGC CGCCACCCTG ACGCTGGCGA TGCGCAAGCG GCTCGAGCTG GCCAAGGCGC TGGCGATGAA GCCGAAGCTG CTGTTTCTCG ACGAGGTCAA TGCCGGGCTC AACAGCGCCG AGGTCGAACG CGCCACCAGC CTGATCCATC AGCTCGCGGC GAACGGCATC ACCATCGTGA TGATCGAGCA TCTGATGAAA GTGGTGCTGA ACGTCTGCAC CCGCATCGTC GTGCTGCACA ACGGCCAACT CATCGCCGAC GGCGCGCCGC GCGAGGTGAT CAGCAATCCC GCCGTGGTCG AGGCCTATCT CGGCCAGCAA TACGCCAAAC GGACCGCCCG CAATGGCTAG
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Protein sequence | MSELLQLTGV SRHFSGLQAL RDVSLSVSGG EVLGLIGPNG AGKTTLVNTI CGVTPANSGT VSFDGRDITK IKTYQAARLG LARTFQIVQP FAEFSALDNV AAAALFSQPG ASLRSAREAA REHLAFVGLE PQADQSAATL TLAMRKRLEL AKALAMKPKL LFLDEVNAGL NSAEVERATS LIHQLAANGI TIVMIEHLMK VVLNVCTRIV VLHNGQLIAD GAPREVISNP AVVEAYLGQQ YAKRTARNG
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