Gene RPB_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0144 
Symbol 
ID3908115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp157311 
End bp158060 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID637882026 
ProductABC transporter related 
Protein accessionYP_483767 
Protein GI86747271 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC TGCTGCAACT CACCGGCGTC TCCCGGCACT TCTCCGGCCT GCAGGCGCTG 
CGCGACGTCT CGCTGTCGGT GTCGGGCGGC GAGGTGCTCG GCCTTATCGG GCCGAACGGC
GCCGGCAAGA CCACGCTGGT CAACACCATC TGCGGCGTCA CCCCGGCGAA TTCCGGCACC
GTCAGCTTCG ACGGCAGGGA CATCACGAAG ATCAAGACCT ATCAGGCCGC CCGGCTCGGG
CTGGCACGCA CCTTCCAGAT CGTGCAGCCC TTCGCCGAAT TCTCCGCGCT CGACAACGTC
GCCGCCGCGG CGCTGTTCTC GCAGCCGGGC GCCAGCCTGA GATCGGCCCG CGAGGCGGCG
CGCGAGCATC TGGCTTTCGT CGGGCTGGAA CCACAGGCCG ATCAATCCGC CGCCACCCTG
ACGCTGGCGA TGCGCAAGCG GCTCGAGCTG GCCAAGGCGC TGGCGATGAA GCCGAAGCTG
CTGTTTCTCG ACGAGGTCAA TGCCGGGCTC AACAGCGCCG AGGTCGAACG CGCCACCAGC
CTGATCCATC AGCTCGCGGC GAACGGCATC ACCATCGTGA TGATCGAGCA TCTGATGAAA
GTGGTGCTGA ACGTCTGCAC CCGCATCGTC GTGCTGCACA ACGGCCAACT CATCGCCGAC
GGCGCGCCGC GCGAGGTGAT CAGCAATCCC GCCGTGGTCG AGGCCTATCT CGGCCAGCAA
TACGCCAAAC GGACCGCCCG CAATGGCTAG
 
Protein sequence
MSELLQLTGV SRHFSGLQAL RDVSLSVSGG EVLGLIGPNG AGKTTLVNTI CGVTPANSGT 
VSFDGRDITK IKTYQAARLG LARTFQIVQP FAEFSALDNV AAAALFSQPG ASLRSAREAA
REHLAFVGLE PQADQSAATL TLAMRKRLEL AKALAMKPKL LFLDEVNAGL NSAEVERATS
LIHQLAANGI TIVMIEHLMK VVLNVCTRIV VLHNGQLIAD GAPREVISNP AVVEAYLGQQ
YAKRTARNG