| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0142 |
|---|
| Symbol | |
|---|
| ID | 3908113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 155520 |
|---|
| End bp | 156386 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637882024 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_483765 |
|---|
| Protein GI | 86747269 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG TCCAGATCCT GATCAACGCG CTGGTGCTGG GCAGTCTCTA CGCCTGCATC
GCGATCGGGT TTTCGCTGGT GTGGGGCGTG CTCAACGTCA TCAACCTGAT CCACGGCTCG
TTCATCGTGC TCGGCGCCTA CCTCGCCTTC GGCCTGTACC AGTCGCTGCA TCTGTCGCCG
TGGTACGCGA TCGTGGTCGC GGCGCCCGTG TTCTTCGTGT TCGGCTACAT CGTGCAGCGG
CTGATCCTCA ACCGGGTCAT CACCGCGCCG GTGCTGGTGA CGCTGACGCT GACCTTCGGG
CTCGATCTGA TCCTGAACAA TGCGATGATC TATGTCTTCA CCGCCGATTA TCGCCGCCTG
ACGCTGATTC CGCCGCTCGG CTCGGTGTCG TTCGAGGGCG TGGTGGTTCC GGTCGACCGG
CTGATCGCGA CCGCGACCGC GCTGGCGCTG ACCGGCCTGC TGTATCTGCT GCTGCGCCGC
TCCAGAGTCG GCCGCGCCAT CGTCGCGGTG CGGCTCGATC GTGACGCCGC GGTGCTGATG
GGCGTCCATG TACCCTCGAT CTACGCGGTT GCGTTCGGCC TCGGCGCGGC GCTGGCCGGC
TGCGCCGGCG TGCTGATGGC GCTGATCTTC CCGATCTCGC CGCTGACCTC GTCGGCCTAT
CTGGGCAAGG CCTTCGTGGT CTGCGTGCTC GGCGGGCTCG GCAGCGTGTC CGGCGCGCTG
GCCGGCGGAA TGTTGCTGGC GCTGGTCGAA AGCGTCGGCT CGGCGTTCTT CGGCCCGGCG
CACGCCACCA CGCTGTCGTT CCTGCTGTTG ATCATCTTCC TGATCCTGCG CCCGCAGGGC
CTGGTCGGCC GAAAGGGCTT CGAATGA
|
|---|
| Protein sequence | MQAVQILINA LVLGSLYACI AIGFSLVWGV LNVINLIHGS FIVLGAYLAF GLYQSLHLSP
WYAIVVAAPV FFVFGYIVQR LILNRVITAP VLVTLTLTFG LDLILNNAMI YVFTADYRRL
TLIPPLGSVS FEGVVVPVDR LIATATALAL TGLLYLLLRR SRVGRAIVAV RLDRDAAVLM
GVHVPSIYAV AFGLGAALAG CAGVLMALIF PISPLTSSAY LGKAFVVCVL GGLGSVSGAL
AGGMLLALVE SVGSAFFGPA HATTLSFLLL IIFLILRPQG LVGRKGFE
|
|---|
| |