| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0132 |
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| Symbol | |
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| ID | 3908103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 142384 |
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| End bp | 143982 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882014 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_483755 |
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| Protein GI | 86747259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA CGAAGCGGTC CTTTGTTATC GGCTCCCTCG GAGGCCTGGC GATGCTCGGC
CTGCCGGCCG ATCTGCGCGC GCAGCAGGCC GGCGGCGGCA CGTTGGTGAT CGGCTCGACG
CAGGTGCCGC GGCACTTCAA CGGCGCGGTG CAGTCGGGCA TCGCCACCGC GCTGCCGAGC
ACGCAGATTT TCGCCAGCCC GCTGCGCTTC GACGAGAACT GGAATCCGCA GCCGTATCTC
GCCAAATCCT GGGAGGTCGC GCCCGACGGT CTGTCGATTA CCCTGAAGCT GGTCGACGAC
GCGGTGTTTC ACGACGGCAA GCCGGTGACC TCCGAGGACG TCGCGTTCTC GATCATGACG
ATCAAGGCCA ACCACCCGTT CAAGACCATG CTGGCCGCGG TCGACAAGGT GGAGACGCCC
GATCCGAAGA CCGCGGTGAT CAAGCTGGCG CATCCGCATC CGGCGCTGCT GCTGGCGATG
TCGCCGGCGC TGATGCCGAT CCTGCCGAAG CACGTCTACG GCGACGGCCA GGACGTCAAG
GCGCATCCGG CCAACCTCAA GCCGATCGGT TCCGGCCCGT ACAAGCTCGC CGAATACAAG
CAGGGCGAGT ACTACACGCT GGAGAAGTTC GACAAATTCT TCATCCCGGG CCGTCCGAAG
CTCGACAAGA TCGTGGTGCG GCTGATCTCG GATCCGAACG CGCTGATGGT CTCGGCCGAG
CGCGGCGAGG TCCACGCCGT GCCGTTCGTC ACCGGCGTGC GCGACATCGA CCGGCTGGAG
AAGTCGAAGA ACCTCAAGGT CGTCGACAAG GGCTTCGCCG GTCTCGGCGC GCTGAACTGG
CTCGCCTTCA ACACCAAGAA GAAGCCGCTC GACGACGTCC GCGTCCGCCA GGCGATCGCC
TACGCGGCCA ATCGCGACTT CATCGTCAAC AAGCTGATGG GCGGCAAGGC GATGCCGTCG
ACTGGGCCGA TCGCGCCGGG CTCGCCGTTC GAGGAGAAGA ACGTCCAGCT CTACAAGTTC
GACGTCGCCA AGGCCAAAAA GCTGCTCGAC GAGGCCGGCC TCAAGCCGGA CGGCAACGGC
GTCCGCGCCA CGCTGACGAT CGACTACCTC CCGGGCAGCG ACGAGCAGCA GCGCAACGTC
GCCGAATACA TGCGCTCGGC GCTGAAGCGT GTCGGCCTGA ACCTCGAAGT CCGCGCCGCG
CCCGACTTCC CGACCTGGGC GCAGCGGGTC TCGAACTTCG ACTTCGATCT GACCATGGAC
TCGGTCTACA ATTGGGCCGA TCCGGTGATC GGCGTCGACC GGACCTATCT GACCTCGAAT
ATCCGCAAGG GCATCATCTG GTCGAACACG CAGCAATATT CCAACCCGAA GGTCGACGAG
ATCCTCGGCA AGGCCGCTGT GGAGACCTCG GCGGAGAAGC GCAAGGCGCT TTATTCGGAG
TTCCAGAAGA TCGTCGTCGA CGAGGTGCCG GTGTTCTTCA TCAACGCCGT GCCGTTCCAC
AACGCCTTCG CCAACGGCCT CGGCGGGCTG CCGACCACGA TCTGGGGCGT CGTCTCGCCG
CTCGACGAAG TGCACTGGGT CACGCCGCCG AAGACCTGA
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| Protein sequence | MKLTKRSFVI GSLGGLAMLG LPADLRAQQA GGGTLVIGST QVPRHFNGAV QSGIATALPS
TQIFASPLRF DENWNPQPYL AKSWEVAPDG LSITLKLVDD AVFHDGKPVT SEDVAFSIMT
IKANHPFKTM LAAVDKVETP DPKTAVIKLA HPHPALLLAM SPALMPILPK HVYGDGQDVK
AHPANLKPIG SGPYKLAEYK QGEYYTLEKF DKFFIPGRPK LDKIVVRLIS DPNALMVSAE
RGEVHAVPFV TGVRDIDRLE KSKNLKVVDK GFAGLGALNW LAFNTKKKPL DDVRVRQAIA
YAANRDFIVN KLMGGKAMPS TGPIAPGSPF EEKNVQLYKF DVAKAKKLLD EAGLKPDGNG
VRATLTIDYL PGSDEQQRNV AEYMRSALKR VGLNLEVRAA PDFPTWAQRV SNFDFDLTMD
SVYNWADPVI GVDRTYLTSN IRKGIIWSNT QQYSNPKVDE ILGKAAVETS AEKRKALYSE
FQKIVVDEVP VFFINAVPFH NAFANGLGGL PTTIWGVVSP LDEVHWVTPP KT
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